Cre12.g552850.t1.1 Glycine cleavage T-protein family

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g552850.t1.1 chromosome_12 Glycine cleavage T-protein family CDS 7863654 7869614 - 5 960

Phytozome

Locus Genomic View Functional Annotation
Cre12.g552850.t1.1 Cre12.g552850.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
CGL77 g13481.t1 JGI148091 30792987 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0004
motif_0004_1

motif_0004_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
7e-35
Motif Bicluster: 
bicluster_0004
Width: 
24
Number of Sites: 
1
Consensus: 
TgCTGCtgCTgCtgcTGCtGCngC
motif_0004_2

motif_0004_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
Motif Bicluster: 
bicluster_0004
Width: 
0
Number of Sites: 
1
 0.27
bicluster_0212
motif_0212_1

motif_0212_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:17
e.value: 
4.1e-35
Motif Bicluster: 
bicluster_0212
Width: 
21
Number of Sites: 
1
Consensus: 
CTGCcGCtGCTGCtGCtGctG
motif_0212_2

motif_0212_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:17
e.value: 
6.6e-30
Motif Bicluster: 
bicluster_0212
Width: 
21
Number of Sites: 
1
Consensus: 
gCCGCCgCCgCCgCCgCCgCC
 0.25

GO Terms

GO:0004047 GO:0006546 GO:0005737 -

aminomethyltransferase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: (6S)-tetrahydrofolate + S-aminomethyldihydrolipoylprotein = (6R)-5,10-methylenetetrahydrofolate + NH3 + dihydrolipoylprotein.

glycine catabolic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the breakdown of glycine, aminoethanoic acid.

cytoplasm

GO Category: 
cellular_component
Details: 
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI148091

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