Cre12.g558450.t1.2 spermidine synthase 1

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g558450.t1.2 chromosome_12 spermidine synthase 1 CDS 7209381 7215854 - 6 473
Locus Genomic View Functional Annotation
Cre12.g558450.t1.2 Cre12.g558450.t1.2

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Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
SPD1 g13360.t1, Cre12.g558450.t1.1 JGI206050 30792728 Search
Motif 1 Motif 2 Residual
bicluster_0028

motif_0028_1

e.value: 
0.00000028
Motif Bicluster: 
Width: 
24
Number of Sites: 
1
Consensus: 
ATAccagcCCAAaCtAAAcCgAAc

motif_0028_2

e.value: 
0.0000000000000067
Motif Bicluster: 
Width: 
24
Number of Sites: 
1
Consensus: 
cCAncagCACCagCAgcAgCagCA
0.12
bicluster_0159

motif_0159_1

e.value: 
0.000017
Motif Bicluster: 
Width: 
15
Number of Sites: 
1
Consensus: 
aagtAtaaTAaAAtA

motif_0159_2

e.value: 
1
Motif Bicluster: 
Width: 
24
Number of Sites: 
1
Consensus: 
GgCAgCgGCAGgagCAGCaGCAgC
0.24
GO:0003824 -

catalytic activity

GO Category: 
molecular_function
Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences
Link to STRING STRING Network
JGI206050
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