Cre12.g560300.t1.2 RNA-binding (RRM/RBD/RNP motifs) family protein

Summary

	Chromosome	Product	Feature Type	Transcript Start	End	Strand	Length
Cre12.g560300.t1.2	chromosome_12	RNA-binding (RRM/RBD/RNP motifs) family protein	CDS	6955528	6959631	+	4 103

Phytozome

Locus Genomic View	Functional Annotation
Cre12.g560300.t1.2	Cre12.g560300.t1.2

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Product Synonyms

Symbol	Augustus Synonyms	STRING	PAC	Record in ChlamyCyc
	g13313.t3, Cre12.g560300.t1.1	JGI380575	30792965	Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

	Motif 1	Motif 2	Residual
bicluster_0042	motif_0042_1 motif_0042_1 Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16 e.value:  9.4e-21 Motif Bicluster:  bicluster_0042 Width:  21 Number of Sites:  1 Consensus:  gCAnCagCAgCagCAcCAGCc	motif_0042_2 motif_0042_2 Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16 e.value:  0.000000026 Motif Bicluster:  bicluster_0042 Width:  21 Number of Sites:  1 Consensus:  gCCaCCgCCGCCGCcgCCgCc	0.15
bicluster_0055	motif_0055_1 motif_0055_1 Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16 e.value:  0.0011 Motif Bicluster:  bicluster_0055 Width:  24 Number of Sites:  1 Consensus:  TaTaaaaATntatncagaaAtgaA	motif_0055_2 motif_0055_2 Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16 e.value:  0.00056 Motif Bicluster:  bicluster_0055 Width:  15 Number of Sites:  1 Consensus:  cgTGTGTGTgTgTGT	0.34

GO Terms

GO:0003676 -

nucleic acid binding

GO Category: 

molecular_function

Details: 

Interacting selectively and non-covalently with any nucleic acid.

Regulated by

Displaying 1 - 2 of 2

Regulator Locus	Interaction	Weight	Other Influences

Regulates

String Network

Link to STRING	STRING Network
JGI380575

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