Cre12.g560800.t1.2 peptidase M20/M25/M40 family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g560800.t1.2 chromosome_12 peptidase M20/M25/M40 family protein CDS 6889178 6893078 + 3 900

Phytozome

Locus Genomic View Functional Annotation
Cre12.g560800.t1.2 Cre12.g560800.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g13302.t1, Cre12.g560800.t1.1 JGI425943 30793220 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0060
motif_0060_1

motif_0060_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0059
Motif Bicluster: 
bicluster_0060
Width: 
24
Number of Sites: 
1
Consensus: 
atcAcgtnAtantATATaTAttat
motif_0060_2

motif_0060_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
29
Motif Bicluster: 
bicluster_0060
Width: 
21
Number of Sites: 
1
Consensus: 
TAGTTgGGGCTGGTaTTTcCA
 0.16
bicluster_0103
motif_0103_1

motif_0103_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000000058
Motif Bicluster: 
bicluster_0103
Width: 
24
Number of Sites: 
1
Consensus: 
GCaGCagCAgCAGCAcctgCAGCA
motif_0103_2

motif_0103_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
2.5
Motif Bicluster: 
bicluster_0103
Width: 
21
Number of Sites: 
1
Consensus: 
AAacncCAgtagtcTtnAaaA
 0.16

GO Terms

GO:0016787 GO:0008152 -

hydrolase activity

GO Category: 
molecular_function
Details: 
Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.

metabolic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI425943

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