Cre12.g560950.t1.2 photosystem I subunit G

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre12.g560950.t1.2 chromosome_12 photosystem I subunit G CDS 6881158 6883069 + 1 911

Phytozome

Locus Genomic View Functional Annotation
Cre12.g560950.t1.2 Cre12.g560950.t1.2

Help

Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g13299.t1, Cre12.g560950.t1.1 JGI165416 30792049 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0057
motif_0057_1

motif_0057_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000052
Motif Bicluster: 
bicluster_0057
Width: 
24
Number of Sites: 
1
Consensus: 
ATAGgTCAGCAAaTGGaTGAACAT
motif_0057_2

motif_0057_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0058
Motif Bicluster: 
bicluster_0057
Width: 
21
Number of Sites: 
1
Consensus: 
GgcaGGGGnGggGcGgGGcGG
 0.05
bicluster_0186
motif_0186_1

motif_0186_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.45
Motif Bicluster: 
bicluster_0186
Width: 
15
Number of Sites: 
1
Consensus: 
TCTGCCagTTTncTT
motif_0186_2

motif_0186_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
34
Motif Bicluster: 
bicluster_0186
Width: 
20
Number of Sites: 
1
Consensus: 
AAAACTAAAAcTACcTGCAT
 0.05

GO Terms

GO:0015979 GO:0009522 GO:0016020 -

photosynthesis

GO Category: 
biological_process
Details: 
The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.

photosystem I

GO Category: 
cellular_component
Details: 
A photosystem that contains an iron-sulfur reaction center associated with accessory pigments and electron carriers. In cyanobacteria and chloroplasts, photosystem I functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin; in photosynthetic bacteria that have only a single type I photosystem, such as the green sulfur bacteria, electrons can go either to ferredoxin (Fd) -> NAD+ or to menaquinone (MK) -> Cytb/FeS -> Cytc555 -> photosystem I (cyclic photophosphorylation).

membrane

GO Category: 
cellular_component
Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI165416

Add comment

Log in to post comments