Cre13.g562450.t1.2 ARM repeat superfamily protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre13.g562450.t1.2 chromosome_13 ARM repeat superfamily protein CDS 70166 78835 + 8 669

Phytozome

Locus Genomic View Functional Annotation
Cre13.g562450.t1.2 Cre13.g562450.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
IPB3, ITN7 g13842.t1, Cre13.g562450.t1.1 JGI127508 30784672 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0126
motif_0126_1

motif_0126_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.001
Motif Bicluster: 
bicluster_0126
Width: 
21
Number of Sites: 
1
Consensus: 
CGcTgCcGccgcTGCtgCTGc
motif_0126_2

motif_0126_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
11000
Motif Bicluster: 
bicluster_0126
Width: 
24
Number of Sites: 
1
Consensus: 
TTgTgCTcAAatCATttggaTATT
 0.10
bicluster_0157
motif_0157_1

motif_0157_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.72
Motif Bicluster: 
bicluster_0157
Width: 
24
Number of Sites: 
1
Consensus: 
TagTTCCntTtgCtTTttGttttt
motif_0157_2

motif_0157_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
20
Motif Bicluster: 
bicluster_0157
Width: 
24
Number of Sites: 
1
Consensus: 
CAgCgGcAGCAcCAGCagCAGCAG
 0.10

GO Terms

GO:0008536 GO:0006886 -

Ran GTPase binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with Ran, a conserved Ras-like GTP-binding protein, implicated in nucleocytoplasmic transport, cell cycle progression, spindle assembly, nuclear organization and nuclear envelope (NE) assembly.

intracellular protein transport

GO Category: 
biological_process
Details: 
The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI127508

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