Cre13.g566000.t1.2 10-formyltetrahydrofolate synthetase

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre13.g566000.t1.2 chromosome_13 10-formyltetrahydrofolate synthetase CDS 642767 653092 - 10 325

Phytozome

Locus Genomic View Functional Annotation
Cre13.g566000.t1.2 Cre13.g566000.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
FTL1 g13929.t1, Cre13.g566000.t1.1 JGI380616 30783932 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0037
motif_0037_1

motif_0037_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000069
Motif Bicluster: 
bicluster_0037
Width: 
21
Number of Sites: 
1
Consensus: 
CncCGCCActGcCnCCgCCac
motif_0037_2

motif_0037_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.034
Motif Bicluster: 
bicluster_0037
Width: 
24
Number of Sites: 
1
Consensus: 
TTGGTTTAGTgTgGGcTGGTaTnT
 0.20
bicluster_0066
motif_0066_1

motif_0066_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
2300
Motif Bicluster: 
bicluster_0066
Width: 
24
Number of Sites: 
1
Consensus: 
CCCACATCAaaCnaGCgtTGaCcT
motif_0066_2

motif_0066_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
3200
Motif Bicluster: 
bicluster_0066
Width: 
15
Number of Sites: 
1
Consensus: 
gTAggTTtTGtaGcT
 0.15

GO Terms

GO:0004329 GO:0005524 GO:0009396 -

formate-tetrahydrofolate ligase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: ATP + formate + tetrahydrofolate = ADP + phosphate + 10-formyltetrahydrofolate.

ATP binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.

folic acid-containing compound biosynthetic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the formation of folic acid and its derivatives.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI380616

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