Cre13.g570600.t1.2 CTR type copper ion transporter

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre13.g570600.t1.2 chromosome_13 CTR type copper ion transporter CDS 1254126 1259806 - 5 680

Phytozome

Locus Genomic View Functional Annotation
Cre13.g570600.t1.2 Cre13.g570600.t1.2

Help

Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g14035.t1, Cre13.g570600.t1.1 JGI196101 30784712 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0137
motif_0137_1

motif_0137_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000019
Motif Bicluster: 
bicluster_0137
Width: 
21
Number of Sites: 
1
Consensus: 
AGcagcAGcaaCAGcngnggc
motif_0137_2

motif_0137_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
Motif Bicluster: 
bicluster_0137
Width: 
0
Number of Sites: 
1
 0.28
bicluster_0162
motif_0162_1

motif_0162_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000013
Motif Bicluster: 
bicluster_0162
Width: 
15
Number of Sites: 
1
Consensus: 
CnGCGGCGGcGGCaG
motif_0162_2

motif_0162_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
Motif Bicluster: 
bicluster_0162
Width: 
0
Number of Sites: 
1
 0.26

GO Terms

GO:0005375 GO:0035434 GO:0016021 -

copper ion transmembrane transporter activity

GO Category: 
molecular_function
Details: 
Catalysis of the transfer of copper (Cu) ions from one side of a membrane to the other.

copper ion transmembrane transport

GO Category: 
biological_process
Details: 
The directed movement of copper (Cu) ions across a membrane by means of some agent such as a transporter or pore.

integral to membrane

GO Category: 
cellular_component
Details: 
Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI196101

Add comment

Log in to post comments