Cre13.g579582.t1.1 starch synthase 3

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre13.g579582.t1.1 chromosome_13 starch synthase 3 CDS 2399436 2404101 - 4 665

Phytozome

Locus Genomic View Functional Annotation
Cre13.g579582.t1.1 Cre13.g579582.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g14239.t1 Not available 30783995 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0005
motif_0005_1

motif_0005_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
3.9e-20
Motif Bicluster: 
bicluster_0005
Width: 
21
Number of Sites: 
1
Consensus: 
cCgcCaCCacCgCCacCnCCn
motif_0005_2

motif_0005_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0057
Motif Bicluster: 
bicluster_0005
Width: 
11
Number of Sites: 
1
Consensus: 
ACAaACAcAcA
 0.49
bicluster_0023
motif_0023_1

motif_0023_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000000034
Motif Bicluster: 
bicluster_0023
Width: 
21
Number of Sites: 
1
Consensus: 
gAGCTgcgGaAGgAGCAGcAG
motif_0023_2

motif_0023_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000021
Motif Bicluster: 
bicluster_0023
Width: 
24
Number of Sites: 
1
Consensus: 
TaTcTTaAtgtcTccaGAnantAA
 0.10

GO Terms

GO:2001070 -

starch binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with starch.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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