Cre13.g580850.t1.2 ribosomal protein L22

Chromosome Product Feature Type Transcript Start End Strand Length
Cre13.g580850.t1.2 chromosome_13 ribosomal protein L22 CDS 2558600 2560863 - 2 263
Locus Genomic View Functional Annotation
Cre13.g580850.t1.2 Cre13.g580850.t1.2

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Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
PRPL22 g14267.t2, Cre13.g580850.t1.1 JGI413651 30784624 Search
Motif 1 Motif 2 Residual
bicluster_0046

motif_0046_1

e.value: 
0.00000000000039
Motif Bicluster: 
Width: 
21
Number of Sites: 
1
Consensus: 
CAgCAGcGgCtGCAGCAGCnG

motif_0046_2

e.value: 
0.088
Motif Bicluster: 
Width: 
21
Number of Sites: 
1
Consensus: 
tGGTggtGGcGGcGGcgGcGG
0.22
bicluster_0084

motif_0084_1

e.value: 
0.033
Motif Bicluster: 
Width: 
14
Number of Sites: 
1
Consensus: 
TaaTTGTtaTTgTT

motif_0084_2

e.value: 
79
Motif Bicluster: 
Width: 
15
Number of Sites: 
1
Consensus: 
GCAgCGgCAGCagcA
0.15
GO:0003735 GO:0006412 GO:0005840 -

structural constituent of ribosome

GO Category: 
molecular_function
Details: 
The action of a molecule that contributes to the structural integrity of the ribosome.

translation

GO Category: 
biological_process
Details: 
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.

ribosome

GO Category: 
cellular_component
Details: 
An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences
Link to STRING STRING Network
JGI413651
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