Cre13.g602350.t1.2 Aldolase-type TIM barrel family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre13.g602350.t1.2 chromosome_13 Aldolase-type TIM barrel family protein CDS 4491331 4495439 + 4 108

Phytozome

Locus Genomic View Functional Annotation
Cre13.g602350.t1.2 Cre13.g602350.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g14556.t1, Cre13.g602350.t1.1 JGI346907 30784267 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0007
motif_0007_1

motif_0007_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000000004
Motif Bicluster: 
bicluster_0007
Width: 
21
Number of Sites: 
1
Consensus: 
GCCgCTGCcGCcgCTgCcGCt
motif_0007_2

motif_0007_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.035
Motif Bicluster: 
bicluster_0007
Width: 
21
Number of Sites: 
1
Consensus: 
AATTgnaCTaTnttGTgcnaA
 0.08
bicluster_0097
motif_0097_1

motif_0097_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0071
Motif Bicluster: 
bicluster_0097
Width: 
24
Number of Sites: 
1
Consensus: 
TGCTGCTncTGCnGCaGCtGCcGC
motif_0097_2

motif_0097_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.2
Motif Bicluster: 
bicluster_0097
Width: 
14
Number of Sites: 
1
Consensus: 
CAgATGgcATcCAT
 0.14

GO Terms

GO:0004425 -

indole-3-glycerol-phosphate synthase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate = 1-(indol-3-yl)glycerol 3-phosphate + CO2 + H2O.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI346907

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