Cre13.g607500.t1.2 KU70 homolog

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre13.g607500.t1.2 chromosome_13 KU70 homolog CDS 5119846 5127927 + 8 081

Phytozome

Locus Genomic View Functional Annotation
Cre13.g607500.t1.2 Cre13.g607500.t1.2

Help

Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g14646.t1, Cre13.g607500.t1.1 Not available 30783931 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0094
motif_0094_1

motif_0094_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000000035
Motif Bicluster: 
bicluster_0094
Width: 
15
Number of Sites: 
1
Consensus: 
GcGGCGGcGgcGGcG
motif_0094_2

motif_0094_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
130
Motif Bicluster: 
bicluster_0094
Width: 
24
Number of Sites: 
1
Consensus: 
AnGAnGagGagGAgGAGGnaGAcg
 0.32
bicluster_0198
motif_0198_1

motif_0198_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0008
Motif Bicluster: 
bicluster_0198
Width: 
24
Number of Sites: 
1
Consensus: 
gcgGCAgcaGccgcgGCaGtgGCg
motif_0198_2

motif_0198_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
1.5
Motif Bicluster: 
bicluster_0198
Width: 
21
Number of Sites: 
1
Consensus: 
cCagCCcCgCCGCCgCCgCCg
 0.31

GO Terms

GO:0003676 GO:0003677 GO:0006303 GO:0004003 -

nucleic acid binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with any nucleic acid.

DNA binding

GO Category: 
molecular_function
Details: 
Any molecular function by which a gene product interacts selectively with DNA (deoxyribonucleic acid).

double-strand break repair via nonhomologous end joining

GO Category: 
biological_process
Details: 
The repair of a double-strand break in DNA in which the two broken ends are rejoined with little or no sequence complementarity. Information at the DNA ends may be lost due to the modification of broken DNA ends.

ATP-dependent DNA helicase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction drives the unwinding of the DNA helix.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

Add comment

Log in to post comments