Cre14.g617600.t1.2 DegP protease 10

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre14.g617600.t1.2 chromosome_14 DegP protease 10 CDS 1405319 1411532 + 6 213

Phytozome

Locus Genomic View Functional Annotation
Cre14.g617600.t1.2 Cre14.g617600.t1.2

Help

Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g14880.t1, Cre14.g617600.t1.1 JGI196220 30776594 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0127
motif_0127_1

motif_0127_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
8
Motif Bicluster: 
bicluster_0127
Width: 
24
Number of Sites: 
1
Consensus: 
CcAcCAgcgccGCCATCagcngcc
motif_0127_2

motif_0127_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
18
Motif Bicluster: 
bicluster_0127
Width: 
24
Number of Sites: 
1
Consensus: 
TTACatTcaTGatTAgcTaAGGaA
 0.16
bicluster_0162
motif_0162_1

motif_0162_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000013
Motif Bicluster: 
bicluster_0162
Width: 
15
Number of Sites: 
1
Consensus: 
CnGCGGCGGcGGCaG
motif_0162_2

motif_0162_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
Motif Bicluster: 
bicluster_0162
Width: 
0
Number of Sites: 
1
 0.26

GO Terms

GO:0004252 GO:0006508 -

serine-type endopeptidase activity

GO Category: 
molecular_function
Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).

proteolysis

GO Category: 
biological_process
Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI196220

Add comment

Log in to post comments