Cre14.g629960.t1.1 phytochelatin synthase 1 (PCS1)

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre14.g629960.t1.1 chromosome_14 phytochelatin synthase 1 (PCS1) CDS 3331597 3338882 - 7 285

Phytozome

Locus Genomic View Functional Annotation
Cre14.g629960.t1.1 Cre14.g629960.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g15171.t1 Not available 30776213 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0001
motif_0001_1

motif_0001_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
8.9e-28
Motif Bicluster: 
bicluster_0001
Width: 
24
Number of Sites: 
1
Consensus: 
CAcCaCCagCaCCacCaCCacCaC
motif_0001_2

motif_0001_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
Motif Bicluster: 
bicluster_0001
Width: 
0
Number of Sites: 
1
 0.02
bicluster_0075
motif_0075_1

motif_0075_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
4.7e-16
Motif Bicluster: 
bicluster_0075
Width: 
21
Number of Sites: 
1
Consensus: 
AgCAGCaGCagCaGCaaCAGC
motif_0075_2

motif_0075_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000000000000095
Motif Bicluster: 
bicluster_0075
Width: 
23
Number of Sites: 
1
Consensus: 
GGtGGaGGtGGnGGaGgggGgGG
 0.23

GO Terms

GO:0016756 GO:0046872 GO:0010038 GO:0046938 -

glutathione gamma-glutamylcysteinyltransferase activity

GO Category: 
molecular_function
Details: 
Catalysis of the reaction: glutathione + Glu(-Cys)(n)-Gly = Gly + Glu(-Cys)(n+1)-Gly.

metal ion binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with any metal ion.

response to metal ion

GO Category: 
biological_process
Details: 
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a metal ion stimulus.

phytochelatin biosynthetic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the formation of phytochelatins, any of a group of peptides that bind metals (Cd, Zn, Cu, Pb, Hg) in thiolate coordination complexes. The structure is of the type (gamma-glutamyl-cysteinyl)n-glycine, where n is 2 to 11.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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