Cre16.g651923.t1.2 carotenoid isomerase

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre16.g651923.t1.2 chromosome_16 carotenoid isomerase CDS 1363742 1370186 + 6 444

Phytozome

Locus Genomic View Functional Annotation
Cre16.g651923.t1.2 Cre16.g651923.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g15768.t1, Cre16.g651923.t1.1 JGI196597 30776797 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0087
motif_0087_1

motif_0087_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
22
Motif Bicluster: 
bicluster_0087
Width: 
24
Number of Sites: 
1
Consensus: 
CCttCaCctCCGCCgCCtCCgCct
motif_0087_2

motif_0087_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
2700
Motif Bicluster: 
bicluster_0087
Width: 
15
Number of Sites: 
1
Consensus: 
GCAGCAGCAGCAGcA
 0.12
bicluster_0102
motif_0102_1

motif_0102_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0037
Motif Bicluster: 
bicluster_0102
Width: 
21
Number of Sites: 
1
Consensus: 
CAgatgncaAAcAnaTngcAA
motif_0102_2

motif_0102_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
3.7
Motif Bicluster: 
bicluster_0102
Width: 
24
Number of Sites: 
1
Consensus: 
GccGGaGGnGGaGGcGGaGgnGGC
 0.09

GO Terms

GO:0016491 GO:0055114 -

oxidoreductase activity

GO Category: 
molecular_function
Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.

oxidation-reduction process

GO Category: 
biological_process
Details: 
A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI196597

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