Cre16.g654500.t1.1 eukaryotic translation initiation factor 2

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre16.g654500.t1.1 chromosome_16 eukaryotic translation initiation factor 2 CDS 1647861 1651335 - 3 474

Phytozome

Locus Genomic View Functional Annotation
Cre16.g654500.t1.1 Cre16.g654500.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
EIF3F g15822.t1 JGI120842 30777505 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0065
motif_0065_1

motif_0065_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
2
Motif Bicluster: 
bicluster_0065
Width: 
20
Number of Sites: 
1
Consensus: 
gGAnGcGGnGGCGgcGgcgG
motif_0065_2

motif_0065_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
82
Motif Bicluster: 
bicluster_0065
Width: 
15
Number of Sites: 
1
Consensus: 
GTgAGTGcATtTGCA
 0.14
bicluster_0079
motif_0079_1

motif_0079_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0018
Motif Bicluster: 
bicluster_0079
Width: 
21
Number of Sites: 
1
Consensus: 
AagcTnTatgTAttTaTgaAA
motif_0079_2

motif_0079_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00028
Motif Bicluster: 
bicluster_0079
Width: 
21
Number of Sites: 
1
Consensus: 
gCtGCcGCtaCTGctGCcaCC
 0.19

GO Terms

GO:0005515 -

protein binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI120842

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