Cre16.g663850.t1.1 starch synthase 4

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre16.g663850.t1.1 chromosome_16 starch synthase 4 CDS 2906521 2912513 + 5 992

Phytozome

Locus Genomic View Functional Annotation
Cre16.g663850.t1.1 Cre16.g663850.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g16028.t1 JGI153781 30778255 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0086
motif_0086_1

motif_0086_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
29000
Motif Bicluster: 
bicluster_0086
Width: 
15
Number of Sites: 
1
Consensus: 
aAGnaGCAGcGgCAG
motif_0086_2

motif_0086_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.38
Motif Bicluster: 
bicluster_0086
Width: 
15
Number of Sites: 
1
Consensus: 
TGTTtctGTtggTGt
 0.18
bicluster_0107
motif_0107_1

motif_0107_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000028
Motif Bicluster: 
bicluster_0107
Width: 
21
Number of Sites: 
1
Consensus: 
CgGCAgCaGCAGCGGCgGCgG
motif_0107_2

motif_0107_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00002
Motif Bicluster: 
bicluster_0107
Width: 
10
Number of Sites: 
1
Consensus: 
TTGTGTTTgt
 0.26

GO Terms

GO:0009058 -

biosynthetic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI153781

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