Cre16.g671250.t1.2 Na+/H+ antiporter 6

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre16.g671250.t1.2 chromosome_16 Na+/H+ antiporter 6 CDS 4396553 4406968 - 10 415

Phytozome

Locus Genomic View Functional Annotation
Cre16.g671250.t1.2 Cre16.g671250.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g16294.t1, Cre16.g671250.t1.1 Not available 30777982 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0116
motif_0116_1

motif_0116_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000082
Motif Bicluster: 
bicluster_0116
Width: 
20
Number of Sites: 
1
Consensus: 
CAGCgnCAGCGGCagcgGCa
motif_0116_2

motif_0116_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
41
Motif Bicluster: 
bicluster_0116
Width: 
15
Number of Sites: 
1
Consensus: 
TGgttGTGTgggTGT
 0.10
bicluster_0161
motif_0161_1

motif_0161_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0005
Motif Bicluster: 
bicluster_0161
Width: 
24
Number of Sites: 
1
Consensus: 
acCAcCaGaAgCAgCAgcAgCAgc
motif_0161_2

motif_0161_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.031
Motif Bicluster: 
bicluster_0161
Width: 
22
Number of Sites: 
1
Consensus: 
GGCAGCagCAGCAGCaGctgcA
 0.17

GO Terms

GO:0015299 GO:0006812 GO:0055085 GO:0016021 -

solute:hydrogen antiporter activity

GO Category: 
molecular_function
Details: 
Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out).

cation transport

GO Category: 
biological_process
Details: 
The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.

transmembrane transport

GO Category: 
biological_process
Details: 
The process in which a solute is transported from one side of a membrane to the other.

integral to membrane

GO Category: 
cellular_component
Details: 
Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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