Cre16.g675350.t1.1 tripeptidyl peptidase ii

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre16.g675350.t1.1 chromosome_16 tripeptidyl peptidase ii CDS 6167456 6181365 + 13 909

Phytozome

Locus Genomic View Functional Annotation
Cre16.g675350.t1.1 Cre16.g675350.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g16611.t1 JGI396066 30777618 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0051
motif_0051_1

motif_0051_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0052
Motif Bicluster: 
bicluster_0051
Width: 
21
Number of Sites: 
1
Consensus: 
CAGCanCaccAGCAgCAGCAc
motif_0051_2

motif_0051_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.33
Motif Bicluster: 
bicluster_0051
Width: 
15
Number of Sites: 
1
Consensus: 
tAtaAcaTtTGAtAA
 0.21
bicluster_0075
motif_0075_1

motif_0075_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
4.7e-16
Motif Bicluster: 
bicluster_0075
Width: 
21
Number of Sites: 
1
Consensus: 
AgCAGCaGCagCaGCaaCAGC
motif_0075_2

motif_0075_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000000000000095
Motif Bicluster: 
bicluster_0075
Width: 
23
Number of Sites: 
1
Consensus: 
GGtGGaGGtGGnGGaGgggGgGG
 0.23

GO Terms

GO:0004252 GO:0006508 -

serine-type endopeptidase activity

GO Category: 
molecular_function
Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).

proteolysis

GO Category: 
biological_process
Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI396066

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