Cre16.g683595.t1.1 cation calcium exchanger 4

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre16.g683595.t1.1 chromosome_16 cation calcium exchanger 4 CDS 7285670 7291541 + 5 871

Phytozome

Locus Genomic View Functional Annotation
Cre16.g683595.t1.1 Cre16.g683595.t1.1

Help

Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
CAX4 g16805.t1, Cre01.g069550.t1.1 Not available 30778260 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0039
motif_0039_1

motif_0039_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
2.4e-24
Motif Bicluster: 
bicluster_0039
Width: 
21
Number of Sites: 
1
Consensus: 
CTGCaGCTGCtgCtnCTGCTg
motif_0039_2

motif_0039_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000000000022
Motif Bicluster: 
bicluster_0039
Width: 
24
Number of Sites: 
1
Consensus: 
aGGcGgAgGtGgAgGaGGaGGnGG
 0.24
bicluster_0096
motif_0096_1

motif_0096_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00013
Motif Bicluster: 
bicluster_0096
Width: 
21
Number of Sites: 
1
Consensus: 
GAGGCGGaGgcGGaGGcGGAG
motif_0096_2

motif_0096_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
6.1
Motif Bicluster: 
bicluster_0096
Width: 
24
Number of Sites: 
1
Consensus: 
AtAGAAatgAAAGCgAGTGtGaAT
 0.21

GO Terms

GO:0055085 GO:0016021 -

transmembrane transport

GO Category: 
biological_process
Details: 
The process in which a solute is transported from one side of a membrane to the other.

integral to membrane

GO Category: 
cellular_component
Details: 
Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

Add comment

Log in to post comments