Cre16.g691000.t1.2 elongation factor P (EF-P) family protein

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre16.g691000.t1.2 chromosome_16 elongation factor P (EF-P) family protein CDS 746664 750445 + 3 781

Phytozome

Locus Genomic View Functional Annotation
Cre16.g691000.t1.2 Cre16.g691000.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g15665.t1, Cre16.g691000.t1.1 JGI106740 30777419 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0047
motif_0047_1

motif_0047_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0015
Motif Bicluster: 
bicluster_0047
Width: 
24
Number of Sites: 
1
Consensus: 
tanattgTtaaAtTgaAgcnAAAg
motif_0047_2

motif_0047_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00019
Motif Bicluster: 
bicluster_0047
Width: 
24
Number of Sites: 
1
Consensus: 
AgcagCAGcAgCAgcAGCaggGgC
 0.18
bicluster_0088
motif_0088_1

motif_0088_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0015
Motif Bicluster: 
bicluster_0088
Width: 
23
Number of Sites: 
1
Consensus: 
CgCCagCaccgCCgCcgCCgcCa
motif_0088_2

motif_0088_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
2.7
Motif Bicluster: 
bicluster_0088
Width: 
15
Number of Sites: 
1
Consensus: 
TgtgatTgTaTTTna
 0.15

GO Terms

GO:0003746 GO:0006414 GO:0043043 GO:0005737 -

translation elongation factor activity

GO Category: 
molecular_function
Details: 
Functions in chain elongation during polypeptide synthesis at the ribosome.

translational elongation

GO Category: 
biological_process
Details: 
The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis.

peptide biosynthetic process

GO Category: 
biological_process
Details: 
The chemical reactions and pathways resulting in the formation of peptides, compounds of 2 or more (but usually less than 100) amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another. This may include the translation of a precursor protein and its subsequent processing into a functional peptide.

cytoplasm

GO Category: 
cellular_component
Details: 
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI106740

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