Cre17.g719900.t1.2 catalytics;carbohydrate kinases;phosphoglucan, water dikinases

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre17.g719900.t1.2 chromosome_17 catalytics;carbohydrate kinases;phosphoglucan, water dikinases CDS 2934922 2944603 + 9 681

Phytozome

Locus Genomic View Functional Annotation
Cre17.g719900.t1.2 Cre17.g719900.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g17424.t1, Cre17.g719900.t1.1 JGI192398 30782781 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0018
motif_0018_1

motif_0018_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000000003
Motif Bicluster: 
bicluster_0018
Width: 
21
Number of Sites: 
1
Consensus: 
CGCCGCtGcCGCtGCcGCtGC
motif_0018_2

motif_0018_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
Motif Bicluster: 
bicluster_0018
Width: 
0
Number of Sites: 
1
 0.18
bicluster_0188
motif_0188_1

motif_0188_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000041
Motif Bicluster: 
bicluster_0188
Width: 
24
Number of Sites: 
1
Consensus: 
CCgcCaCCGCCagCnCcgcCnCca
motif_0188_2

motif_0188_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000000039
Motif Bicluster: 
bicluster_0188
Width: 
15
Number of Sites: 
1
Consensus: 
CgGCAGCAGCAGCAG
 0.25

GO Terms

GO:2001070 GO:0005524 GO:0016301 GO:0016310 -

starch binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with starch.

ATP binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.

kinase activity

GO Category: 
molecular_function
Details: 
Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule.

phosphorylation

GO Category: 
biological_process
Details: 
The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI192398

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