Cre17.g720050.t1.2 FtsH extracellular protease family

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre17.g720050.t1.2 chromosome_17 FtsH extracellular protease family CDS 2955992 2960456 + 4 464

Phytozome

Locus Genomic View Functional Annotation
Cre17.g720050.t1.2 Cre17.g720050.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
FHL2 g17427.t1, Cre17.g720050.t1.1 JGI58334 30782442 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0142
motif_0142_1

motif_0142_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
19
Motif Bicluster: 
bicluster_0142
Width: 
14
Number of Sites: 
1
Consensus: 
CaTaCAcACatGCA
motif_0142_2

motif_0142_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
2300
Motif Bicluster: 
bicluster_0142
Width: 
15
Number of Sites: 
1
Consensus: 
AgCTGCATTTTgAcT
 0.11
bicluster_0193
motif_0193_1

motif_0193_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000063
Motif Bicluster: 
bicluster_0193
Width: 
23
Number of Sites: 
1
Consensus: 
CACaCacacatACACaCAtgCAa
motif_0193_2

motif_0193_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
19
Motif Bicluster: 
bicluster_0193
Width: 
24
Number of Sites: 
1
Consensus: 
gaGGtaGCAGtgGCgGgGGcaGCG
 0.15

GO Terms

GO:0005524 GO:0004222 GO:0006508 -

ATP binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.

metalloendopeptidase activity

GO Category: 
molecular_function
Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.

proteolysis

GO Category: 
biological_process
Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI58334

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