Cre17.g725750.t1.2

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre17.g725750.t1.2 chromosome_17 CDS 3584761 3588632 + 3 871

Phytozome

Locus Genomic View Functional Annotation
Cre17.g725750.t1.2 Cre17.g725750.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g17551.t1, Cre17.g725750.t1.1 JGI138565 30782390 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0013
motif_0013_1

motif_0013_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0000011
Motif Bicluster: 
bicluster_0013
Width: 
21
Number of Sites: 
1
Consensus: 
TgCTGCTGctGCTGCtGCTGc
motif_0013_2

motif_0013_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.045
Motif Bicluster: 
bicluster_0013
Width: 
15
Number of Sites: 
1
Consensus: 
gTGcagGTGtAGgTG
 0.15
bicluster_0021
motif_0021_1

motif_0021_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
3.7
Motif Bicluster: 
bicluster_0021
Width: 
15
Number of Sites: 
1
Consensus: 
AACAtgaTattcaGA
motif_0021_2

motif_0021_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
460
Motif Bicluster: 
bicluster_0021
Width: 
23
Number of Sites: 
1
Consensus: 
gCaGCGGCgGCAacggCAgCggC
 0.24

GO Terms

GO:0003723 GO:0030529 -

RNA binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with an RNA molecule or a portion thereof.

ribonucleoprotein complex

GO Category: 
cellular_component
Details: 
A macromolecular complex containing both protein and RNA molecules.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI138565

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