Cre17.g727300.t1.2 12-oxophytodienoate reductase 1

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre17.g727300.t1.2 chromosome_17 12-oxophytodienoate reductase 1 CDS 3724590 3728841 + 4 251

Phytozome

Locus Genomic View Functional Annotation
Cre17.g727300.t1.2 Cre17.g727300.t1.2

Help

Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
NFO2 g17583.t1, Cre17.g727300.t1.1 JGI408431 30781808 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0041
motif_0041_1

motif_0041_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0036
Motif Bicluster: 
bicluster_0041
Width: 
21
Number of Sites: 
1
Consensus: 
GGAGgaGgaggnGgAGgtGGn
motif_0041_2

motif_0041_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.0042
Motif Bicluster: 
bicluster_0041
Width: 
15
Number of Sites: 
1
Consensus: 
tgcGTGCGTGTGTGt
 0.22
bicluster_0089
motif_0089_1

motif_0089_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00000000000014
Motif Bicluster: 
bicluster_0089
Width: 
24
Number of Sites: 
1
Consensus: 
GTGngTGgGTGgGTGgGTGgGTgg
motif_0089_2

motif_0089_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.013
Motif Bicluster: 
bicluster_0089
Width: 
24
Number of Sites: 
1
Consensus: 
CTgCtGCTgCTGCtgctGCtGCtg
 0.25

GO Terms

GO:0010181 GO:0016491 GO:0055114 -

FMN binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with FMN, flavin mononucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes.

oxidoreductase activity

GO Category: 
molecular_function
Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.

oxidation-reduction process

GO Category: 
biological_process
Details: 
A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI408431

Add comment

Log in to post comments