Cre17.g735400.t1.2 vacuolar protein sorting-associated protein 2.3

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre17.g735400.t1.2 chromosome_17 vacuolar protein sorting-associated protein 2.3 CDS 5154410 5158988 + 4 578

Phytozome

Locus Genomic View Functional Annotation
Cre17.g735400.t1.2 Cre17.g735400.t1.2

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
VPS2B g17791.t1, Cre17.g735400.t1.1 JGI195566 30782779 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0155
motif_0155_1

motif_0155_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000065
Motif Bicluster: 
bicluster_0155
Width: 
15
Number of Sites: 
1
Consensus: 
cCACaCAcgCaCaCA
motif_0155_2

motif_0155_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.024
Motif Bicluster: 
bicluster_0155
Width: 
21
Number of Sites: 
1
Consensus: 
GCCgcCaCCGCCtCCACCgCc
 0.25
bicluster_0166
motif_0166_1

motif_0166_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.000000025
Motif Bicluster: 
bicluster_0166
Width: 
11
Number of Sites: 
1
Consensus: 
TGtGTGCaTGt
motif_0166_2

motif_0166_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.58
Motif Bicluster: 
bicluster_0166
Width: 
23
Number of Sites: 
1
Consensus: 
tttAntTTGgcCTGgTATtTaCA
 0.32

GO Terms

GO:0015031 -

protein transport

GO Category: 
biological_process
Details: 
The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network
JGI195566

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