Cre24.g755597.t1.1 Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain

Summary

Chromosome Product Feature Type Transcript Start End Strand Length
Cre24.g755597.t1.1 scaffold_24 Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain CDS 60797 68975 - 8 178

Phytozome

Locus Genomic View Functional Annotation
Cre24.g755597.t1.1 Cre24.g755597.t1.1

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Product Synonyms

Symbol Augustus Synonyms STRING PAC Record in ChlamyCyc
g18260.t1, Cre05.g231450.t1.1, Cre05.g231450.t1.2 Not available 30782915 Search

Gene Expression

FPKM

Genome Browser

Regulatory Modules

Motif 1 Motif 2 Residual
bicluster_0091
motif_0091_1

motif_0091_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
0.00054
Motif Bicluster: 
bicluster_0091
Width: 
20
Number of Sites: 
1
Consensus: 
CaCCgCCacCnCCaCcgCCa
motif_0091_2

motif_0091_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
42
Motif Bicluster: 
bicluster_0091
Width: 
21
Number of Sites: 
1
Consensus: 
ATgAAgTAAtaCAtAtACaGC
 0.25
bicluster_0098
motif_0098_1

motif_0098_1

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
190
Motif Bicluster: 
bicluster_0098
Width: 
23
Number of Sites: 
1
Consensus: 
TGaAAgtACtTTAtataaTActt
motif_0098_2

motif_0098_2

Submitted by Anonymous (not verified) on Wed, 05/20/2015 - 14:16
e.value: 
10000
Motif Bicluster: 
bicluster_0098
Width: 
15
Number of Sites: 
1
Consensus: 
AAGCAtAAaAacCtG
 0.18

GO Terms

GO:0016491 GO:0051537 GO:0055114 -

oxidoreductase activity

GO Category: 
molecular_function
Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.

2 iron, 2 sulfur cluster binding

GO Category: 
molecular_function
Details: 
Interacting selectively and non-covalently with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands.

oxidation-reduction process

GO Category: 
biological_process
Details: 
A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Regulated by

Displaying 1 - 2 of 2
Regulator Locus Interaction Weight Other Influences

Regulates

String Network

Link to STRING STRING Network

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