Module 7 Residual: 0.57Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)

Summary

Residual	Motif 1 e-value	Motif 2 e-value	Conditions	Genes	version
0.57	5.6e-17	0.00000026	84	31	20160204

Motifs

Motif 1
	e-value: 5.6e-17
Motif 2
	e-value: 0.00000026

Module Plots

Members

MSMEG_6719 Alpha/beta hydrolase fold protein (EC 3.3.2.9) (Epoxide hydrolase)	MSMEG_4224 Uncharacterized protein
MSMEG_3263 Xylulose kinase	MSMEG_2355 Uncharacterized protein
MSMEG_6293 Transcriptional regulator, TetR family (Transcriptional regulatory protein)	MSMEG_5457 Shikimate 5-dehydrogenase (Shikimate/quinate 5-dehydrogenase) (EC 1.1.1.25)
MSMEG_1826 dTDP-RhA:a-D-GlcNAc-diphosphoryl polyprenol, a-3-L-rhamnosyl transferase	MSMEG_4852 Enoyl-CoA hydratase, putative (Enoyl-CoA hydratase/isomerase)
MSMEG_1825 dTDP-4-dehydrorhamnose reductase (EC 1.1.1.133) (dTDP-4-keto-L-rhamnose reductase) (dTDP-6-deoxy-L-lyxo-4-hexulose reductase) (dTDP-6-deoxy-L-mannose dehydrogenase) (dTDP-L-rhamnose synthase)	MSMEG_1191 Uncharacterized protein
MSMEG_4730 Uncharacterized protein	MSMEG_6430 Uncharacterized protein
MSMEG_4731 Acyl-CoA synthase (Fatty-acid-CoA ligase FadD23)	MSMEG_4729 Uncharacterized protein
MSMEG_3544 Uncharacterized protein	MSMEG_4728 Acyltransferase papA2 (Condensation domain protein)
MSMEG_4851 Caib/baif family protein (L-carnitine dehydratase/bile acid-inducible protein F) (EC 2.8.3.16)	MSMEG_0919 HBHA-like protein (Heparin-binding hemagglutinin) (Uncharacterized protein)
MSMEG_1109 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase (SEPHCHC synthase) (EC 2.2.1.9) (Menaquinone biosynthesis protein MenD)	MSMEG_5458 Acetyltransferase Pat (EC 2.3.1.-) (GCN5-related N-acetyltransferase) (GNAT) (Protein acetyltransferase) (Pat)
MSMEG_4853 Peptidase M24 (EC 3.5.3.3) (Peptidase, M24 family protein) (EC 3.4.-.-)	MSMEG_1750 Uncharacterized protein
MSMEG_6050 ABC-type transporter, periplasmic component (Solute-binding lipoprotein)	MSMEG_3890 Pup--protein ligase (EC 6.3.2.n2) (Proteasome accessory factor A) (Pup-conjugating enzyme)
MSMEG_4855 Amidohydrolase 2 (Amidohydrolase family protein)	MSMEG_3891 Alpha/beta hydrolase fold protein (EC 3.-.-.-) (Hydrolase)
MSMEG_4854 Peptidase M24 (Peptidase, M24 family protein) (EC 3.4.-.-)	MSMEG_3588 Uncharacterized protein
MSMEG_1748 Uncharacterized protein	MSMEG_0228 Adenylate and Guanylate cyclase catalytic domain protein
MSMEG_5035 Uncharacterized protein

Conditions

Wild.type.rep1.y

KO_stationary.phase_rep2

Biological.replicate.5.of.7..falcarinol.treatment

WT.vs..DamtR.without.N_rep1

KO_log.phase_rep1

dcpA.knockout.rep2

M..smegmatis.Acid.NO.treated

Mycobacterium.smegmatis.Spheroplast.induced

dosR.WT_Replicate4

Biological.replicate.4.of.7..ethambutol.treatment

Bedaquiline.vs..DMSO.30min

dosR.WT_Replicate3

Tet.CarD.vs.Control..Replicates.1..2..and.3.

mc2155.pMind..vs.mc2155.pMind.6189.replicate.4

Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.

Wild.type.rep2.y

Plogcy5plogcy3slide110norm

Biological.replicate.7.of.7..falcarinol.treatment

Biological.replicate.6.of.6..negative.control

WT.vs..DamtR.without.N_.dyeswap_rep1

WT.vs..DamtR.without.N_.dyeswap_rep2

Biological.replicate.1.of.6..kanamycin.treatment

Biological.replicate.1.of.6..isoniazid.treatment

Biological.replicate.7.of.7..ethambutol.treatment

Biological.replicate.6.of.6..kanamycin.treatment

Biological.replicate.3.of.7..falcarinol.treatment

Biological.replicate.5.of.6..isoniazid.treatment

Biological.replicate.6.of.7..panaxydol.treatment

DamtR.with.vs..DamtR.without.N_.rep1

Biological.replicate.4.of.6..isoniazid.treatment

Biological.replicate.3.of.6..isoniazid.treatment

Biological.replicate.2.of.6..kanamycin.treatment

X0.6..vs..50..air.saturation.Replicate.3

Biological.replicate.4.of.6..kanamycin.treatment

M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1

WT.vs..DamtR.N.surplus_rep2

WT.vs..DamtR.N.surplus_rep1

M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2

mc2155.vs.Dcrp1.replicate.2

Plogcy5plogcy3slide113norm

Slow.vs..Fast.Replicate.3

X3dbfcy3plogcy5slide607norm

mc2155.vs.Dcrp1.replicate.4

Biological.replicate.3.of.6..negative.control

Biological.replicate.5.of.7..panaxydol.treatment

dcpA.knockout.rep1

Biological.replicate.2.of.6..isoniazid.treatment

X3dbfcy5plogcy3slide601norm

stphcy3plogcy5slide581norm

X2.5..vs..50..air.saturation.Replicate.1

DamtR.with.vs..DamtR.without.N_dyeswap_.rep1

Biological.replicate.2.of.7..panaxydol.treatment

Biological.replicate.2.of.6..negative.control

Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.

Biological.replicate.6.of.6..isoniazid.treatment

X4XR.rep2

Biological.replicate.2.of.7..ethambutol.treatment

X4XR.rep1

Slow.vs..Fast.Replicate.4

Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.

Biological.replicate.4.of.7..falcarinol.treatment

mc2155.vs.Dcrp1.replicate.1

WT.vs..DglnR.N_starvation_dye.swap_rep2

Biological.replicate.7.of.7..panaxydol.treatment

X3dbfcy5plogcy3slide603norm

BatchCulture_LBTbroth_ExponentialPhase_Replicate1

mc2155.pMind..vs.mc2155.pMind.6189.replicate.3

stphcy5plogcy3slide487norm

WT.vs..DamtR.N.surplus_dyeswap_rep2

WT.with.vs..without.N_rep2

Biological.replicate.1.of.7..panaxydol.treatment

Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.

WT.with.vs..without.N_rep1

DglnR_without.vs..with.N_dyeswap_rep2

X2XR.rep1

mc2155.pMind..vs.mc2155.pMind.6189.replicate.1

JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1

WT.vs..DglnR.N_starvation_rep1

JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3

BatchCulture_LBTbroth_StationaryPhase_Replicate2

BatchCulture_LBTbroth_StationaryPhase_Replicate1

M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3

M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1

X4dbfcy3plogcy5slide903norm

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