Module 61 Residual: 0.53
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.53 | 2.9e-40 | 0.13 | 75 | 29 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 2.9e-40 | |
| Motif 2 |
 |
| e-value: 0.13 |
| MSMEG_4772 AMP-dependent synthetase and ligase (Acyl-CoA synthase) | MSMEG_3418 Uncharacterized protein |
| MSMEG_4773 Amidohydrolase 2 (Amidohydrolase family protein) | MSMEG_6621 Bacterial luciferase family protein (Luciferase-like protein) |
| MSMEG_4774 AMP-dependent synthetase and ligase | MSMEG_4107 Phosphoglycerate mutase (EC 5.4.2.-) (Phosphoglycerate mutase, putative) |
| MSMEG_3506 Putative amino acid decarboxylase, Pyridoxal-dependent protein (EC 4.1.1.-) (Pyridoxal-dependent decarboxylase) (EC 4.1.1.28) | MSMEG_0837 Uncharacterized protein |
| MSMEG_4425 Nitroreductase (Putative oxidoreductase) | MSMEG_6907 MmcI protein |
| MSMEG_4017 BmyD protein (Uncharacterized protein) | MSMEG_6646 2-methylisocitrate lyase (2-MIC) (MICL) (EC 4.1.3.30) ((2R,3S)-2-methylisocitrate lyase) |
| MSMEG_1183 Histidine ammonia-lyase (EC 4.3.1.3) | MSMEG_6648 Pyruvate carboxylase (EC 6.4.1.1) |
| MSMEG_5092 Uncharacterized protein | MSMEG_5241 GAF family protein |
| MSMEG_6500 Uncharacterized protein | MSMEG_3855 Uncharacterized protein |
| MSMEG_6017 Aminotransferase, class I | MSMEG_6029 Uncharacterized protein |
| MSMEG_4879 Luciferase-like protein (Uncharacterized protein) | MSMEG_2484 Uncharacterized protein |
| MSMEG_4877 CaiB/BaiF family protein (L-carnitine dehydratase/bile acid-inducible protein F) | MSMEG_2620 Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96) (Uncharacterized protein) |
| MSMEG_1992 L-carnitine dehydratase/bile acid-inducible protein F | MSMEG_1182 Imidazolonepropionase (EC 3.5.2.7) (Imidazolone-5-propionate hydrolase) |
| MSMEG_2753 Conserved transmembrane protein (Uncharacterized protein) | MSMEG_1062 O-succinylbenzoic acid--CoA ligase (Putative O-succinylbenzoic acid--CoA ligase MenE) (EC 6.2.1.26) |
| MSMEG_2754 Uncharacterized protein |
KO_stationary.phase_rep2
WT.vs..DamtR.without.N_rep1
Biological.replicate.2.of.7..panaxydol.treatment
WT.vs..DamtR.without.N_rep2
M..smegmatis.Acid.NO.treated
dosR.WT_Replicate4
Biological.replicate.4.of.7..ethambutol.treatment
Bedaquiline.vs..DMSO.30min
Biological.replicate.1.of.6..negative.control
KO_log.phase_rep2
KO_log.phase_rep1
Plogcy5plogcy3slide110norm
Wild.type.rep1.y
MB100pruR.vs..MB100.rep.4
MB100pruR.vs..MB100.rep.2
MB100pruR.vs..MB100.rep.1
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.1.of.7..ethambutol.treatment
rel.knockout.rep2
rel.knockout.rep1
Bedaquiline.vs..DMSO..45min
Biological.replicate.5.of.6..isoniazid.treatment
Biological.replicate.6.of.7..panaxydol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.3.of.7..ethambutol.treatment
X3dbfcy5plogcy3slide601norm
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
Biological.replicate.6.of.7..ethambutol.treatment
WT.vs..DamtR.N.surplus_rep1
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
mc2155.vs.Dcrp1.replicate.2
mc2155.vs.Dcrp1.replicate.3
Biological.replicate.1.of.7..panaxydol.treatment
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
dcpA.knockout.rep2
dcpA.knockout.rep1
Plogcy5plogcy3slide111norm
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
Biological.replicate.2.of.7..ethambutol.treatment
WT_log.phase_rep1
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
WT_stationary.phase_rep2
WT_stationary.phase_rep1
X4XR.rep2
X4XR.rep1
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.4.of.7..falcarinol.treatment
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.2
Biological.replicate.3.of.7..falcarinol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.vs..DglnR.N_starvation_rep1
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.vs..DamtR.N.surplus_dyeswap_rep2
DglnR_without.vs..with.N_dyeswap_rep2
X2XR.rep1
X2XR.rep2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
Biological.replicate.2.of.6..negative.control
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
Plogcy5plogcy3slide113norm
BatchCulture_LBTbroth_StationaryPhase_Replicate3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
X4dbfcy3plogcy5slide903norm
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