Module 93 Residual: 0.56
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.56 | 4.7e-16 | 0.0000000026 | 75 | 30 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 4.7e-16 | |
| Motif 2 |
 |
| e-value: 0.0000000026 |
| MSMEG_6676 Probable conserved transmembrane protein | MSMEG_2867 3-ketosteroid dehydrogenase (Fumarate reductase/succinate dehydrogenase flavoprotein-like protein) (EC 1.3.99.4) |
| MSMEG_6675 Uncharacterized protein | MSMEG_0179 GntR-family transcriptional regulator (Transcriptional regulator, GntR family protein) |
| MSMEG_0824 Uncharacterized protein | MSMEG_4347 Uncharacterized protein |
| MSMEG_0825 Phosphomethylpyrimidine kinase (EC 2.7.4.7) | MSMEG_6374 2-dehydropantoate 2-reductase (EC 1.1.1.169) (Ketopantoate reductase) |
| MSMEG_0826 Phosphomethylpyrimidine synthase (EC 4.1.99.17) (Hydroxymethylpyrimidine phosphate synthase) (Thiamine biosynthesis protein ThiC) | MSMEG_3362 Enoyl-CoA hydratase (Enoyl-CoA hydratase/isomerase) (EC 4.2.1.17) |
| MSMEG_3780 Adenylate and Guanylate cyclase catalytic domain protein | MSMEG_3363 Regulatory protein, TetR (Transcriptional regulator, TetR family) |
| MSMEG_2331 | MSMEG_6769 Sodium/hydrogen exchanger (Transporter, monovalent cation:proton antiporter-2 (CPA2) family protein) |
| MSMEG_3980 Transcriptional regulator, GntR family (Transcriptional regulator, GntR family protein) | MSMEG_0675 Cytochrome P450 144 cyp144 (Putative cytochrome P450 144) (EC 1.14.-.-) |
| MSMEG_5916 Uncharacterized protein | MSMEG_0676 Putative transcriptional regulatory protein |
| MSMEG_1531 Uncharacterized protein | MSMEG_1014 DNA polymerase IV (Pol IV) (EC 2.7.7.7) |
| MSMEG_4991 Uncharacterized protein | MSMEG_6770 Uncharacterized protein |
| MSMEG_1203 Methoxy mycolic acid synthase 1 (EC 2.1.1.-) | MSMEG_4313 Glyoxalase/bleomycin resistance protein/dioxygenase |
| MSMEG_0174 Putative inner membrane protein (Uncharacterized protein) | MSMEG_1530 Integral membrane protein |
| MSMEG_0175 FAD dependent oxidoreductase, putative (Fructosyl-amino acid oxidase, putative) | MSMEG_0168 Formyl-CoA:oxalate CoA-transferase (FCOCT) (EC 2.8.3.16) (Formyl-coenzyme A transferase) |
| MSMEG_1205 Cyclopropane-fatty-acyl-phospholipid synthase 1 (EC 2.1.1.79) (Cyclopropane-fatty-acyl-phospholipid synthase 1 Cmaa1 (Cyclopropane fatty acid synthase) (Cfa synthase) (Cyclopropane mycolic acid synthase 1)) | MSMEG_3812 Acyl-CoA thioesterase |
KO_stationary.phase_rep2
WT.vs..DglnR.N_starvation_rep2
WT.vs..DamtR.without.N_rep1
Biological.replicate.3.of.7..ethambutol.treatment
X4XR.rep1
Biological.replicate.4.of.7..ethambutol.treatment
Biological.replicate.1.of.6..negative.control
MB100pruR.vs..MB100..rep.3
dosR.WT_Replicate1
KO_log.phase_rep2
KO_log.phase_rep1
Plogcy5plogcy3slide110norm
X3dbfcy5plogcy3slide601norm
DglnR_without.vs..with.N_rep1
MB100pruR.vs..MB100.rep.4
DamtR.with.vs..DamtR.without.N_.rep2
DglnR_without.vs..with.N_rep2
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.1.of.7..ethambutol.treatment
rel.knockout.rep2
Wild.type.rep3
Biological.replicate.6.of.7..panaxydol.treatment
M..smegmatis.Acid.NO.treated
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
Biological.replicate.3.of.6..isoniazid.treatment
WT.vs..DamtR.without.N_.dyeswap_rep1
WT_log.phase_rep2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
WT.vs..DglnR.N_starvation_dye.swap_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
mc2155.vs.Dcrp1.replicate.2
Biological.replicate.5.of.6..kanamycin.treatment
Slow.vs..Fast.Replicate.3
Biological.replicate.1.of.7..panaxydol.treatment
mc2155.vs.Dcrp1.replicate.4
dcpA.knockout.rep1
X4dbfcy5plogcy3slide480norm
WT.vs..DamtR.N.surplus_rep1
X2.5..vs..50..air.saturation.Replicate.4
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
X3dbfcy3plogcy5slide607norm
X2.5..vs..50..air.saturation.Replicate.1
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
Biological.replicate.5.of.7..ethambutol.treatment
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
dosR.WT_Replicate3
Biological.replicate.5.of.6..isoniazid.treatment
Biological.replicate.6.of.7..ethambutol.treatment
Biological.replicate.7.of.7..panaxydol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
X4dbfcy5plogcy3slide901norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.with.vs..without.N_rep2
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.with.vs..without.N_rep1
X2XR.rep1
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
WT.vs..DglnR.N_starvation_rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
BatchCulture_LBTbroth_StationaryPhase_Replicate3
BatchCulture_LBTbroth_StationaryPhase_Replicate1
Biological.replicate.2.of.6..kanamycin.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
X4dbfcy3plogcy5slide903norm
Biological.replicate.6.of.7..falcarinol.treatment
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