Module 190 Residual: 0.60
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.60 | 1.5e-21 | 0.0051 | 77 | 24 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 1.5e-21 | |
| Motif 2 |
 |
| e-value: 0.0051 |
| MSMEG_6842 2,2-dialkylglycine decarboxylase (EC 4.1.1.64) (Aminotransferase class-III) | MSMEG_5334 Oxidoreductase, molybdopterin binding protein (Uncharacterized protein) |
| MSMEG_3352 Uncharacterized protein | MSMEG_2097 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase (Peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase) |
| MSMEG_5751 Putative adhesin/hemolysin (Uncharacterized protein) | MSMEG_5544 Oxidoreductase, short chain dehydrogenase/reductase family protein (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.100) |
| MSMEG_4031 Uncharacterized protein | MSMEG_5545 DNA glycosylase (EC 4.2.99.18) (Formamidopyrimidine-DNA glycosylase) |
| MSMEG_6650 Uncharacterized protein | MSMEG_6578 Uncharacterized protein |
| MSMEG_4178 Flavodoxin/nitric oxide synthase | MSMEG_5629 Uncharacterized protein |
| MSMEG_5834 Metallo-beta-lactamase superfamily protein | MSMEG_1290 Dihydroxy-acid dehydratase (DAD) (EC 4.2.1.9) |
| MSMEG_2103 5,10-methylenetetrahydromethanopterin reductase (EC 1.5.99.11) | MSMEG_2178 Integral membrane protein |
| MSMEG_2552 Aldehyde dehydrogenase (NAD) family protein (EC 1.2.1.-) (Putative aldehyde dehydrogenase) (EC 1.2.1.3) | MSMEG_6368 DNA-binding protein (Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein) |
| MSMEG_4242 Conserved regulatory protein (Transcriptional regulatory protein) | MSMEG_0226 Conserved transmembrane proteinm, MmpS5 (MmpS5 protein) |
| MSMEG_3941 GAF family protein | MSMEG_0227 Transcriptional regulator, TetR family (Transcriptional regulator, TetR family protein) |
| MSMEG_5747 Uncharacterized protein | MSMEG_0225 MmpL4 protein (Transmembrane transport protein MmpL1) |
Bedaquiline.vs..DMSO.30min
WT.vs..DamtR.without.N_rep1
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
WT.vs..DamtR.without.N_rep2
Biological.replicate.2.of.6..isoniazid.treatment
Biological.replicate.4.of.7..ethambutol.treatment
dosR.WT_Replicate3
dosR.WT_Replicate2
dosR.WT_Replicate1
KO_log.phase_rep2
KO_log.phase_rep1
Plogcy5plogcy3slide110norm
Biological.replicate.7.of.7..falcarinol.treatment
MB100pruR.vs..MB100.rep.4
Biological.replicate.3.of.7..panaxydol.treatment
MB100pruR.vs..MB100.rep.2
DglnR_without.vs..with.N_rep2
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
rel.knockout.rep2
rel.knockout.rep1
Bedaquiline.vs..DMSO..45min
Biological.replicate.6.of.6..negative.control
Bedaquiline.vs..DMSO.15min
DamtR.with.vs..DamtR.without.N_.rep1
WT.vs..DamtR.without.N_.dyeswap_rep1
X0.6..vs..50..air.saturation.Replicate.2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
X0.6..vs..50..air.saturation.Replicate.4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
Wild.type.rep2.y
Biological.replicate.5.of.6..kanamycin.treatment
X3dbfcy3plogcy5slide607norm
Biological.replicate.3.of.6..negative.control
dcpA.knockout.rep2
dcpA.knockout.rep1
Biological.replicate.2.of.7..falcarinol.treatment
WT_log.phase_rep2
WT.with.vs..without.N_dye.swap_rep1
stphcy3plogcy5slide581norm
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
X2.5..vs..50..air.saturation.Replicate.3
WT_stationary.phase_rep2
WT_stationary.phase_rep1
Biological.replicate.2.of.7..ethambutol.treatment
Biological.replicate.5.of.7..ethambutol.treatment
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Slow.vs..Fast.Replicate.5
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.4.of.7..falcarinol.treatment
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.2
Biological.replicate.7.of.7..panaxydol.treatment
DglnR_without.vs..with.N_rep1
Biological.replicate.5.of.6..negative.control
Biological.replicate.1.of.7..falcarinol.treatment
Wild.type.rep3
WT.vs..DglnR.N_starvation_rep1
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
X2XR.rep1
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
BatchCulture_LBTbroth_StationaryPhase_Replicate3
BatchCulture_LBTbroth_StationaryPhase_Replicate1
Biological.replicate.2.of.6..kanamycin.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
WT.vs..DglnR.N_starvation_dye.swap_rep1
Bedaquiline.vs..DMSO.120min
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