Module 596 Residual: 0.43
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.43 | 2e-30 | 0.31 | 78 | 28 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 2e-30 | |
| Motif 2 |
 |
| e-value: 0.31 |
| MSMEG_5652 Alpha/beta hydrolase fold | MSMEG_1984 Alpha/beta hydrolase fold protein (EC 3.8.1.3) (Haloacetate dehalogenase H-1) |
| MSMEG_5654 Transcriptional regulator, LysR family protein | MSMEG_2752 RNA polymerase sigma factor |
| MSMEG_4039 Aryl-alcohol dehydrogenase (EC 1.1.1.90) | MSMEG_2108 Metal-dependent hydrolase-like protein (Uncharacterized protein) |
| MSMEG_4038 Vanillin dehydrogenase | MSMEG_5818 MCE-family protein MCE1a (Virulence factor Mce family protein) |
| MSMEG_6735 Amino acid permease, putative (Amino acid permease-associated region) | MSMEG_0855 Uncharacterized protein |
| MSMEG_5711 Oxidoreductase, short chain dehydrogenase/reductase family protein (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.-) | MSMEG_2092 D-aminopeptidase (Peptidase S58 DmpA (D-aminopeptidase)) (EC 3.4.11.19) |
| MSMEG_5959 Uncharacterized protein | MSMEG_0914 Uncharacterized protein |
| MSMEG_0407 Dihydrodipicolinate reductase (Uncharacterized protein) | MSMEG_0406 Acyl-CoA dehydrogenase (EC 1.3.8.1) (Acyl-coA-dehydrogenase) |
| MSMEG_5957 GDP-mannose 6-dehydrogenase AlgD (EC 1.1.1.132) | MSMEG_4043 Amidohydrolase 2 (Uncharacterized protein) |
| MSMEG_5263 Transcription elongation factor GreA (Transcript cleavage factor GreA) | MSMEG_5942 AMP-dependent synthetase and ligase (EC 6.2.1.3) |
| MSMEG_2163 Aldehyde Dehydrogenase (EC 1.2.1.16) (Aldehyde dehydrogenase) | MSMEG_5944 GMC oxidoreductase family (EC 1.1.99.13) (Glucose-methanol-choline oxidoreductase) |
| MSMEG_2162 MmcJ protein | MSMEG_1985 LysR family regulatory protein (EC 4.2.1.1) (Transcriptional regulator, LysR family protein) |
| MSMEG_1458 Coenzyme PQQ synthesis C (EC 1.3.3.11) (Tena/thi-4 family protein) | MSMEG_6040 Uncharacterized protein |
| MSMEG_2797 LysR family transcriptional regulator (LysR-family protein transcriptional regulator) | MSMEG_3911 Acyl-CoA dehydrogenase-like protein (Oxidoreductase) |
KO_stationary.phase_rep2
Biological.replicate.5.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep1
KO_log.phase_rep1
Biological.replicate.4.of.6..negative.control
WT.vs..DamtR.without.N_rep2
Mycobacterium.smegmatis.Spheroplast.induced
Biological.replicate.2.of.6..isoniazid.treatment
Biological.replicate.5.of.6..isoniazid.treatment
Bedaquiline.vs..DMSO.30min
Biological.replicate.3.of.7..ethambutol.treatment
MB100pruR.vs..MB100..rep.3
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Wild.type.rep2.y
Wild.type.rep2.x
Wild.type.rep1.y
DglnR_without.vs..with.N_rep2
Biological.replicate.6.of.6..negative.control
WT.vs..DamtR.without.N_.dyeswap_rep1
Biological.replicate.2.of.7..panaxydol.treatment
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.5.of.7..panaxydol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
rel.knockout.rep1
Biological.replicate.4.of.7..falcarinol.treatment
Biological.replicate.6.of.7..falcarinol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
DamtR.with.vs..DamtR.without.N_.rep2
X0.6..vs..50..air.saturation.Replicate.1
X3dbfcy5plogcy3slide601norm
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
Biological.replicate.6.of.7..ethambutol.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
mc2155.vs.Dcrp1.replicate.2
Plogcy5plogcy3slide113norm
Biological.replicate.5.of.6..kanamycin.treatment
Biological.replicate.1.of.7..panaxydol.treatment
WT.vs..DamtR.N.surplus_rep2
dcpA.knockout.rep2
dcpA.knockout.rep1
WT.vs..DamtR.N.surplus_rep1
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
X3dbfcy3plogcy5slide607norm
WT_log.phase_rep1
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.2
Biological.replicate.2.of.6..negative.control
Biological.replicate.2.of.7..ethambutol.treatment
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
stphcy5plogcy3slide487norm
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Biological.replicate.2.of.6..kanamycin.treatment
Slow.vs..Fast.Replicate.2
Biological.replicate.3.of.6..kanamycin.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.vs..DamtR.N.surplus_dyeswap_rep2
X2XR.rep1
X2XR.rep2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
Sub.MIC.INH
BatchCulture_LBTbroth_StationaryPhase_Replicate2
BatchCulture_LBTbroth_StationaryPhase_Replicate1
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
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