Module 614 Residual: 0.57
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.57 | 0.0000000000000079 | 0.27 | 77 | 32 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.0000000000000079 | |
| Motif 2 |
 |
| e-value: 0.27 |
| MSMEG_2974 Peptidyl-prolyl cis-trans isomerase B PpiB (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase, cyclophilin-type) | MSMEG_5889 Uncharacterized protein |
| MSMEG_2975 Metallo-beta-lactamase family protein (Putative glyoxalase II (Hydroxyacylglutathione hydrolase)) (EC 3.1.2.6) | MSMEG_5522 TetR-family transcriptional regulator (Transcriptional Regulator, TetR family protein) |
| MSMEG_2976 Histidine--tRNA ligase (EC 6.1.1.21) (Histidyl-tRNA synthetase) | MSMEG_5521 Acetyl-CoA acetyltransferase |
| MSMEG_5105 Uncharacterized protein | MSMEG_6100 Uncharacterized protein |
| MSMEG_6444 YiaAB two helix domain protein | MSMEG_6103 Dihydropteroate synthase (DHPS) (EC 2.5.1.15) (Dihydropteroate pyrophosphorylase) |
| MSMEG_6752 Glucanase (EC 3.2.1.-) | MSMEG_0406 Acyl-CoA dehydrogenase (EC 1.3.8.1) (Acyl-coA-dehydrogenase) |
| MSMEG_6753 Oxidoreductase, short chain dehydrogenase/reductase family protein (Short-chain dehydrogenase/reductase SDR) | MSMEG_0407 Dihydrodipicolinate reductase (Uncharacterized protein) |
| MSMEG_2126 Uncharacterized protein | MSMEG_4008 2OG-Fe(II) oxygenase (Oxidoreductase, 2OG-Fe(II) oxygenase family protein) |
| MSMEG_3560 Glyoxalase/bleomycin resistance protein/dioxygenase (Uncharacterized protein) | MSMEG_2500 Uncharacterized protein |
| MSMEG_6795 Enoyl-CoA hydratase/isomerase family protein | MSMEG_1011 Short chain dehydrogenase (Short-chain dehydrogenase/reductase SDR) |
| MSMEG_5345 Glycosyl hydrolases family protein 16 | MSMEG_1674 Uncharacterized protein |
| MSMEG_5854 Transcriptional regulator, TetR family protein | MSMEG_3838 Integral membrane protein |
| MSMEG_4185 Methionine synthase (Methionine synthase (5-methyltetrahydrofolate--homocysteine methyltransferase) (Methionine synthase, vitamin-B12 dependent) (MS)) (EC 2.1.1.13) | MSMEG_6807 Transcriptional regulator, TetR family (Transcriptional regulator, TetR family protein) |
| MSMEG_1169 Integral membrane transport protein (Major facilitator superfamily MFS_1) | MSMEG_6808 Uncharacterized protein |
| MSMEG_3617 Uncharacterized protein | MSMEG_3836 Uncharacterized protein |
| MSMEG_2941 NAD dependent epimerase/dehydratase family protein (NAD-dependent epimerase/dehydratase) | MSMEG_3835 Uncharacterized protein (YesF protein) |
Bedaquiline.vs..DMSO.30min
WT.vs..DamtR.without.N_rep1
Biological.replicate.2.of.7..panaxydol.treatment
Bedaquiline.vs..DMSO.15min
Mycobacterium.smegmatis.Spheroplast.induced
Wild.type.rep2.x
Biological.replicate.3.of.7..falcarinol.treatment
MB100pruR.vs..MB100..rep.3
dosR.WT_Replicate2
KO_log.phase_rep2
Wild.type.rep2.y
Plogcy5plogcy3slide110norm
Wild.type.rep1.x
Wild.type.rep1.y
MB100pruR.vs..MB100.rep.2
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
rel.knockout.rep2
rel.knockout.rep1
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.6..negative.control
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
X0.6..vs..50..air.saturation.Replicate.1
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
X0.6..vs..50..air.saturation.Replicate.4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
X2XR.rep2
stphcy5plogcy3slide487norm
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.2.of.7..ethambutol.treatment
mc2155.vs.Dcrp1.replicate.4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
dcpA.knockout.rep2
dcpA.knockout.rep1
Sub.MIC.INH
WT.vs..DamtR.N.surplus_rep1
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
X3dbfcy5plogcy3slide601norm
WT.with.vs..without.N_dye.swap_rep1
stphcy3plogcy5slide581norm
WT_log.phase_rep1
Biological.replicate.4.of.7..panaxydol.treatment
X3dbfcy5plogcy3slide603norm
X2.5..vs..50..air.saturation.Replicate.3
WT_stationary.phase_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
X4XR.rep2
mc2155.vs.Dcrp1.replicate.3
Biological.replicate.5.of.7..ethambutol.treatment
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Bedaquiline.vs..DMSO.60min
Biological.replicate.6.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
dosR.WT_Replicate3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
Wild.type.rep3
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep1
Biological.replicate.1.of.6..negative.control
Biological.replicate.7.of.7..panaxydol.treatment
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
Biological.replicate.2.of.6..negative.control
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
X4dbfcy3plogcy5slide903norm
Bedaquiline.vs..DMSO.120min
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