Module 676 Residual: 0.52
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.52 | 0.0000000000014 | 0.57 | 80 | 33 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.0000000000014 | |
| Motif 2 |
 |
| e-value: 0.57 |
| MSMEG_2954 LacI-family protein transcriptional regulator (Transcriptional regulator, LacI family) (EC 5.1.1.1) | MSMEG_2353 NmrA-like protein (Secreted protein) |
| MSMEG_1935 TetR-family protein transcriptional regulator (TetR-family transcriptional regulator) | MSMEG_5692 Uncharacterized protein |
| MSMEG_4564 CBS domain protein (Putative signal-transduction protein with CBS domains) | MSMEG_6379 General substrate transporter:Major facilitator superfamily (Transporter, major facilitator family protein) |
| MSMEG_1936 Uncharacterized protein | MSMEG_4565 Aldo/keto reductase (EC 1.1.1.65) (Oxidoreductase) |
| MSMEG_4443 Uncharacterized protein | MSMEG_0518 sn-glycerol-3-phosphate import ATP-binding protein UgpC (EC 3.6.3.20) |
| MSMEG_4441 Cupin domain protein | MSMEG_5016 Conserved domain protein (Heavy metal transport/detoxification protein) |
| MSMEG_5444 RNA polymerase ECF-subfamily sigma factor (RNA polymerase sigma-70 factor, TIGR02957 family protein) | MSMEG_1894 Short chain dehydrogenase |
| MSMEG_5443 Dehydrogenase (FAD-dependent pyridine nucleotide-disulfide oxidoreductase) | MSMEG_6531 Uncharacterized protein |
| MSMEG_6541 Anti-sigma factor antagonist | MSMEG_6532 Transcriptional regulator, TetR family (Transcriptional regulatory protein) |
| MSMEG_3785 PfkB-family protein carbohydrate kinase | MSMEG_4630 Valine--tRNA ligase (EC 6.1.1.9) (Valyl-tRNA synthetase) |
| MSMEG_3203 Lysine exporter protein (LYSE/YGGA) (Transporter, LysE family protein) | MSMEG_0424 Hsp20/alpha crystallin family protein |
| MSMEG_1802 ChaB protein | MSMEG_6579 Uncharacterized protein |
| MSMEG_3786 D-amino acid deaminase | MSMEG_3029 Peptidase A24A, prepilin type IV (Peptidase, A24 (Type IV prepilin peptidase) family protein) |
| MSMEG_6374 2-dehydropantoate 2-reductase (EC 1.1.1.169) (Ketopantoate reductase) | MSMEG_6044 Periplasmic binding proteins and sugar binding domain of the LacI family protein, putative |
| MSMEG_6542 B12 binding domain protein (Cobalamin B12-binding protein) | MSMEG_2424 Signal recognition particle receptor FtsY (SRP receptor) |
| MSMEG_5506 Uncharacterized protein | MSMEG_1790 Uncharacterized protein |
| MSMEG_0985 Dicarboxylic acid transport integral membrane protein KgtP (Sugar transporter family protein) |
Wild.type.rep1.y
KO_stationary.phase_rep1
Bedaquiline.vs..DMSO.30min
WT.vs..DamtR.without.N_rep1
dcpA.knockout.rep2
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.2.of.6..isoniazid.treatment
Biological.replicate.4.of.7..ethambutol.treatment
X2XR.rep1
MB100pruR.vs..MB100..rep.3
dosR.WT_Replicate1
Biological.replicate.5.of.6..negative.control
KO_log.phase_rep2
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Plogcy5plogcy3slide110norm
Biological.replicate.7.of.7..falcarinol.treatment
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
Biological.replicate.1.of.6..kanamycin.treatment
MB100pruR.vs..MB100.rep.1
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.1.of.7..ethambutol.treatment
rel.knockout.rep2
rel.knockout.rep1
MB100pruR.vs..MB100.rep.2
Biological.replicate.6.of.7..falcarinol.treatment
WT.vs..DamtR.without.N_rep2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
X0.6..vs..50..air.saturation.Replicate.1
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
Biological.replicate.6.of.7..ethambutol.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
stphcy5plogcy3slide487norm
mc2155.vs.Dcrp1.replicate.1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
Biological.replicate.5.of.7..panaxydol.treatment
dcpA.knockout.rep1
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
WT_log.phase_rep2
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
X3dbfcy3plogcy5slide607norm
WT_log.phase_rep1
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
WT.vs..DamtR.N.surplus_rep2
WT_stationary.phase_rep2
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
X4XR.rep1
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
dosR.WT_Replicate3
Biological.replicate.5.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.2
Biological.replicate.3.of.6..kanamycin.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
X4dbfcy5plogcy3slide480norm
Biological.replicate.5.of.6..kanamycin.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.5.of.7..falcarinol.treatment
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
WT.vs..DglnR.N_starvation_dye.swap_rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
Plogcy5plogcy3slide113norm
BatchCulture_LBTbroth_StationaryPhase_Replicate3
Biological.replicate.2.of.6..negative.control
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Biological.replicate.3.of.6..negative.control
X4dbfcy3plogcy5slide903norm
Biological.replicate.6.of.7..panaxydol.treatment
Bedaquiline.vs..DMSO.120min
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