Module 53 Residual: 0.53
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.53 | 9.3e-23 | 0.0000099 | 81 | 22 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 9.3e-23 | |
| Motif 2 |
 |
| e-value: 0.0000099 |
| MSMEG_4751 Uncharacterized protein | MSMEG_3146 Invasin 1 |
| MSMEG_5423 Transcription-repair-coupling factor (TRCF) (EC 3.6.4.-) | MSMEG_6742 Uncharacterized protein |
| MSMEG_5422 Nucleoside triphosphate pyrophosphohydrolase (NTP-PPase) (EC 3.6.1.8) | MSMEG_3145 Peptidoglycan endopeptidase RipA (EC 3.4.-.-) (Resuscitation-promoting factor interaction partner A) (Rpf-interacting protein A) |
| MSMEG_5426 Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)] | MSMEG_6744 Oxidoreductase FAD/NAD (Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein) |
| MSMEG_4750 Ornithine carbamoyltransferase (EC 2.1.3.3) | MSMEG_2548 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100) (Short-chain dehydrogenase/reductase SDR) |
| MSMEG_5424 Transcriptional regulator, TetR family protein | MSMEG_2782 Uncharacterized protein MSMEG_2782/MSMEI_2713 |
| MSMEG_2547 Transcriptional regulator | MSMEG_2781 Protoporphyrinogen oxidase (EC 1.3.3.4) |
| MSMEG_6033 Uncharacterized protein | MSMEG_2780 Uroporphyrinogen decarboxylase (UPD) (URO-D) (EC 4.1.1.37) |
| MSMEG_6743 Lactoylglutathione lyase | MSMEG_4749 Uncharacterized protein |
| MSMEG_2778 Putative ribonuclease D (EC 3.1.-.-) (Ribonuclease D) | MSMEG_2260 Putative transcriptional regulator |
| MSMEG_2779 Uncharacterized protein | MSMEG_2261 Uncharacterized protein |
Wild.type.rep1.y
Bedaquiline.vs..DMSO.30min
WT.vs..DglnR.N_starvation_rep2
WT.vs..DamtR.without.N_rep1
Wild.type.rep2.y
Bedaquiline.vs..DMSO.15min
M..smegmatis.Acid.NO.treated
Mycobacterium.smegmatis.Spheroplast.induced
Biological.replicate.2.of.6..isoniazid.treatment
Biological.replicate.4.of.7..ethambutol.treatment
Biological.replicate.2.of.7..falcarinol.treatment
dosR.WT_Replicate2
dosR.WT_Replicate1
Slow.vs..Fast.Replicate.2
KO_log.phase_rep2
KO_log.phase_rep1
WT.vs..DamtR.N.surplus_dyeswap_rep2
DglnR_without.vs..with.N_rep1
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.7.of.7..ethambutol.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
Biological.replicate.1.of.7..ethambutol.treatment
rel.knockout.rep1
Bedaquiline.vs..DMSO..45min
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.7..falcarinol.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep2
Biological.replicate.4.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X0.6..vs..50..air.saturation.Replicate.1
X3dbfcy5plogcy3slide601norm
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
X0.6..vs..50..air.saturation.Replicate.4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
Biological.replicate.1.of.7..panaxydol.treatment
WT.vs..DamtR.N.surplus_rep2
dcpA.knockout.rep2
dcpA.knockout.rep1
WT.vs..DamtR.N.surplus_rep1
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
X3dbfcy3plogcy5slide607norm
WT_log.phase_rep1
WT.with.vs..without.N_dye.swap_rep1
X2.5..vs..50..air.saturation.Replicate.1
X2.5..vs..50..air.saturation.Replicate.2
WT.with.vs..without.N_dye.swap_rep2
WT_stationary.phase_rep2
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
X4XR.rep1
Slow.vs..Fast.Replicate.4
WT.vs..DglnR.N_starvation_dye.swap_rep1
Biological.replicate.6.of.7..ethambutol.treatment
Biological.replicate.7.of.7..panaxydol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
X3dbfcy5plogcy3slide603norm
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
Wild.type.rep3
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.with.vs..without.N_rep1
Biological.replicate.1.of.6..negative.control
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
WT.vs..DglnR.N_starvation_rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
Sub.MIC.INH
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
X4dbfcy3plogcy5slide903norm
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