Module 94 Residual: 0.56
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.56 | 0.0000000000000016 | 0.0063 | 78 | 21 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.0000000000000016 | |
| Motif 2 |
 |
| e-value: 0.0063 |
| MSMEG_4915 Alpha-1,4 glucan phosphorylase (EC 2.4.1.1) | MSMEG_4916 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase (GMPMT) (EC 2.4.99.16) ((1->4)-alpha-D-glucan:maltose-1-phosphate alpha-D-maltosyltransferase) |
| MSMEG_5761 Cupin domain protein | MSMEG_6115 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein (EC 1.1.1.29) (Phosphoglycerate dehydrogenase) |
| MSMEG_5762 Alcohol dehydrogenase, zinc-binding protein (Zinc-binding oxidoreductase) | MSMEG_4918 1,4-alpha-glucan branching enzyme GlgB (EC 2.4.1.18) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) (Glycogen-branching enzyme) (BE) |
| MSMEG_5763 Uncharacterized protein | MSMEG_2422 Acylphosphatase (EC 3.6.1.7) (Acylphosphate phosphohydrolase) |
| MSMEG_5764 Putative cyanamide hydratase (Urea hydro-lyase/cyanamide hydratase, putative) (EC 4.2.1.69) | MSMEG_5164 Zinc-binding alcohol dehydrogenase family protein |
| MSMEG_3575 CMP/dCMP deaminase, zinc-binding protein (Cytidine/deoxycytidylate deaminase, zinc-binding region) | MSMEG_3394 Cupin domain protein |
| MSMEG_4914 Virginiamycin B lyase (EC 4.2.99.-) (Streptogramin B lyase) | MSMEG_3393 Putative acyl-CoA dehydrogenase |
| MSMEG_3392 Acyl-CoA dehydrogenase (EC 1.3.8.-) (Acyl-CoA dehydrogenase domain protein) | MSMEG_6648 Pyruvate carboxylase (EC 6.4.1.1) |
| MSMEG_6117 D-glucarate dehydratase (EC 4.2.1.40) (Glucarate dehydratase) (EC 4.2.1.40) | MSMEG_3391 L-carnitine dehydratase/bile acid-inducible protein F (EC 2.8.3.16) |
| MSMEG_6646 2-methylisocitrate lyase (2-MIC) (MICL) (EC 4.1.3.30) ((2R,3S)-2-methylisocitrate lyase) | MSMEG_3576 Alpha amylase catalytic region (EC 3.2.1.54) (Alpha-amylase 3) |
| MSMEG_6647 Citrate synthase |
Wild.type.rep1.y
KO_stationary.phase_rep2
WT.vs..DamtR.without.N_rep1
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
WT.vs..DamtR.without.N_rep2
Biological.replicate.4.of.6..negative.control
X3dbfcy5plogcy3slide603norm
Biological.replicate.1.of.6..negative.control
dosR.WT_Replicate3
dosR.WT_Replicate1
KO_log.phase_rep2
Wild.type.rep2.y
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Biological.replicate.7.of.7..falcarinol.treatment
MB100pruR.vs..MB100.rep.4
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..kanamycin.treatment
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.1.of.7..ethambutol.treatment
rel.knockout.rep2
rel.knockout.rep1
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.5.of.6..isoniazid.treatment
Biological.replicate.6.of.7..falcarinol.treatment
Bedaquiline.vs..DMSO.15min
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep1
X3dbfcy5plogcy3slide601norm
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.2
stphcy5plogcy3slide487norm
Biological.replicate.1.of.7..panaxydol.treatment
Biological.replicate.3.of.6..negative.control
dcpA.knockout.rep2
dcpA.knockout.rep1
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
WT_log.phase_rep1
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
X2.5..vs..50..air.saturation.Replicate.2
Biological.replicate.2.of.6..negative.control
WT_stationary.phase_rep1
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
Biological.replicate.4.of.6..isoniazid.treatment
Biological.replicate.2.of.6..isoniazid.treatment
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Slow.vs..Fast.Replicate.5
Biological.replicate.2.of.6..kanamycin.treatment
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.2
Biological.replicate.3.of.6..kanamycin.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
Biological.replicate.5.of.6..negative.control
X4dbfcy5plogcy3slide480norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
Wild.type.rep3
WT.vs..DamtR.N.surplus_dyeswap_rep2
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.vs..DglnR.N_starvation_rep2
DglnR_without.vs..with.N_dyeswap_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
Plogcy5plogcy3slide113norm
BatchCulture_LBTbroth_StationaryPhase_Replicate1
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
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