Module 104 Residual: 0.64
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.64 | 1.6e-19 | 0.0000017 | 78 | 36 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 1.6e-19 | |
| Motif 2 |
 |
| e-value: 0.0000017 |
| MSMEG_6529 Uncharacterized protein | MSMEG_6835 Fatty acid desaturase (EC 1.14.19.3) |
| MSMEG_6528 Uncharacterized protein | MSMEG_4340 NAD/mycothiol-dependent formaldehyde dehydrogenase (EC 1.1.1.306) (Zinc-dependent alcohol dehydrogenase AdhE2) |
| MSMEG_6527 Transcriptional regulator, TetR family (Transcriptional regulator, TetR family protein) | MSMEG_4342 Metallo-beta-lactamase (EC 3.1.2.6) (Metallo-beta-lactamase family protein) |
| MSMEG_6754 MaoC like domain protein (MaoC-like dehydratase) | MSMEG_4613 Uncharacterized protein |
| MSMEG_2311 | MSMEG_4769 Uncharacterized protein |
| MSMEG_1821 Acyl-CoA dehydrogenase (EC 1.3.99.-) (Putative acyl-CoA dehydrogenase fadE25) (EC 1.3.8.1) | MSMEG_4768 Transcriptional activator domain protein (Transcriptional regulator) |
| MSMEG_5086 Fatty-acid-CoA ligase FadD6 (EC 2.3.1.86) (Very-long-chain acyl-CoA synthetase) (EC 6.2.1.-) (EC 6.2.1.3) | MSMEG_6530 Cytochrome C oxidase subunit III (EC 1.9.3.1) (Cytochrome c oxidase subunit III family protein) |
| MSMEG_1188 Uncharacterized protein | MSMEG_4766 Low temperature requirement A (Low temperature requirement protein LtrA) |
| MSMEG_1189 Uncharacterized protein | MSMEG_4712 Pyruvate dehydrogenase E1 component (Alpha subunit) PdhA (EC 1.2.4.1) (Pyruvate dehydrogenase E1 component, alpha subunit) (EC 1.2.4.1) |
| MSMEG_4710 Dihydrolipoamide S-acetyltransferase E2 component PdhC (EC 2.3.1.12) (Dihydrolipoamide acetyltransferase) | MSMEG_5600 Uncharacterized protein |
| MSMEG_4711 Pyruvate dehydrogenase E1 component (Beta subunit) PdhB (Pyruvate dehydrogenase E1 component subunit beta) (EC 1.2.4.1) | MSMEG_4952 Acyl-CoA synthase (Fatty-acid-CoA ligase FadD1) |
| MSMEG_6356 Probable transcriptional regulator, AraC family protein, putative | MSMEG_1822 Biotin-[acetyl-CoA-carboxylase] ligase (EC 6.3.4.15) (Putative biotin--acetyl-CoA-carboxylase ligase (BirA bifunctional protein)) (EC 6.3.4.15) |
| MSMEG_2370 DoxX (DoxX subfamily protein, putative) | MSMEG_2369 LppZ protein |
| MSMEG_0576 Conserved transmembrane transport protein MmpL1 (MmpL4 protein) | MSMEG_4217 Cell wall synthesis protein Wag31 (Antigen 84) |
| MSMEG_5973 Uncharacterized protein | MSMEG_4953 Putative transcriptional regulator |
| MSMEG_0575 MmpS1 protein | MSMEG_0240 Uncharacterized protein |
| MSMEG_4484 Putative conserved transmembrane protein | MSMEG_3582 Lon protease (EC 3.4.21.53) (ATP-dependent protease La) |
| MSMEG_6379 General substrate transporter:Major facilitator superfamily (Transporter, major facilitator family protein) | MSMEG_3581 FabG protein (Short-chain dehydrogenase/reductase SDR) |
KO_stationary.phase_rep1
KO_stationary.phase_rep2
WT.vs..DglnR.N_starvation_rep2
Biological.replicate.4.of.6..negative.control
WT.vs..DamtR.without.N_rep2
Mycobacterium.smegmatis.Spheroplast.induced
dosR.WT_Replicate4
Biological.replicate.4.of.7..ethambutol.treatment
Biological.replicate.2.of.7..falcarinol.treatment
dosR.WT_Replicate3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
Biological.replicate.5.of.6..negative.control
Biological.replicate.2.of.6..kanamycin.treatment
Wild.type.rep2.y
DglnR_without.vs..with.N_rep1
Wild.type.rep1.y
MB100pruR.vs..MB100.rep.4
Biological.replicate.6.of.6..negative.control
DglnR_without.vs..with.N_rep2
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..isoniazid.treatment
Bedaquiline.vs..DMSO.60min
Biological.replicate.6.of.6..kanamycin.treatment
Biological.replicate.3.of.7..falcarinol.treatment
rel.knockout.rep1
Bedaquiline.vs..DMSO..45min
Bedaquiline.vs..DMSO.15min
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X0.6..vs..50..air.saturation.Replicate.1
Biological.replicate.5.of.7..falcarinol.treatment
X0.6..vs..50..air.saturation.Replicate.2
Slow.vs..Fast.Replicate.2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
stphcy5plogcy3slide487norm
Biological.replicate.2.of.7..ethambutol.treatment
dcpA.knockout.rep2
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
WT.vs..DamtR.N.surplus_rep1
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
stphcy3plogcy5slide581norm
WT.with.vs..without.N_dye.swap_rep1
X2.5..vs..50..air.saturation.Replicate.1
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
Biological.replicate.2.of.6..negative.control
WT.vs..DglnR.N_starvation_dye.swap_rep1
Biological.replicate.2.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.4
Slow.vs..Fast.Replicate.5
WT.vs..DglnR.N_starvation_dye.swap_rep2
Biological.replicate.5.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.1
Biological.replicate.6.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
BatchCulture_LBTbroth_ExponentialPhase_Replicate3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
WT.vs..DamtR.N.surplus_dyeswap_rep2
WT.with.vs..without.N_rep2
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
Biological.replicate.1.of.6..negative.control
DglnR_without.vs..with.N_dyeswap_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep1
WT.vs..DglnR.N_starvation_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
BatchCulture_LBTbroth_StationaryPhase_Replicate1
dosR.WT_Replicate2
X4dbfcy3plogcy5slide903norm
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