Module 145 Residual: 0.62
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.62 | 2.2e-16 | 0.0000000000065 | 82 | 26 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 2.2e-16 | |
| Motif 2 |
 |
| e-value: 0.0000000000065 |
| MSMEG_5465 Transcriptional regulator, AraC family protein | MSMEG_4553 GAF domain, putative (Sensor protein) (EC 2.7.13.3) |
| MSMEG_5423 Transcription-repair-coupling factor (TRCF) (EC 3.6.4.-) | MSMEG_5350 PPE family protein, putative |
| MSMEG_5422 Nucleoside triphosphate pyrophosphohydrolase (NTP-PPase) (EC 3.6.1.8) | MSMEG_5384 Uncharacterized protein |
| MSMEG_3113 Carbohydrate kinase, FGGY (EC 2.7.1.17) (Carbohydrate kinase, fggy) | MSMEG_0027 Uncharacterized protein |
| MSMEG_3112 Estradiol 17-beta-dehydrogenase 8 (EC 1.1.1.62) (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.100) | MSMEG_5383 Dehydrogenase/reductase SDR family protein member 4 (EC 1.1.1.184) (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.100) |
| MSMEG_5426 Bifunctional protein GlmU [Includes: UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23) (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)] | MSMEG_0389 Gtf1 (Putative glycosyl transferase) (EC 2.-.-.-) (Uncharacterized protein) |
| MSMEG_5424 Transcriptional regulator, TetR family protein | MSMEG_0388 Macrocin-O-methyltransferase (EC 2.1.1.101) |
| MSMEG_0987 Uncharacterized protein | MSMEG_4316 Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63) (6-O-methylguanine-DNA methyltransferase) (O-6-methylguanine-DNA-alkyltransferase) |
| MSMEG_0986 RemM protein (TetR family transcriptional regulator) | MSMEG_4317 Uncharacterized protein |
| MSMEG_5876 H-N-H endonuclease F-TflIV | MSMEG_0026 Cell division protein CrgA |
| MSMEG_5385 Beta-lactamase domain protein (Metallo-beta-lactamase family protein) | MSMEG_4315 RNA polymerase sigma factor, sigma-70 family protein (RNA polymerase, sigma-24 subunit, ECF subfamily) |
| MSMEG_4551 Monoxygenase (Xenobiotic compound monooxygenase, DszA family) | MSMEG_6823 Short-chain dehydrogenase/reductase SDR (EC 1.1.1.100) |
| MSMEG_4552 Monooxygenase, NtaA/SnaA/SoxA family (Nitrilotriacetate monooxygenase component A) (EC 1.14.13.-) | MSMEG_3114 Photosystem I assembly BtpA (Uncharacterized protein) |
KO_stationary.phase_rep2
WT.vs..DamtR.without.N_rep1
Wild.type.rep2.y
Biological.replicate.4.of.6..negative.control
WT.vs..DamtR.without.N_rep2
Mycobacterium.smegmatis.Spheroplast.induced
X3dbfcy5plogcy3slide603norm
Bedaquiline.vs..DMSO.30min
Biological.replicate.1.of.6..negative.control
MB100pruR.vs..MB100..rep.3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
dosR.WT_Replicate1
Biological.replicate.2.of.6..kanamycin.treatment
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
WT.vs..DamtR.N.surplus_dyeswap_rep2
Biological.replicate.7.of.7..falcarinol.treatment
Biological.replicate.3.of.7..panaxydol.treatment
Biological.replicate.6.of.6..negative.control
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.1.of.7..ethambutol.treatment
rel.knockout.rep2
rel.knockout.rep1
Biological.replicate.3.of.7..falcarinol.treatment
Biological.replicate.6.of.7..falcarinol.treatment
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
Biological.replicate.3.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_.rep2
WT_log.phase_rep2
Sub.MIC.INH
X0.6..vs..50..air.saturation.Replicate.5
WT.vs..DglnR.N_starvation_dye.swap_rep2
Biological.replicate.2.of.7..falcarinol.treatment
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
mc2155.vs.Dcrp1.replicate.2
stphcy5plogcy3slide487norm
mc2155.vs.Dcrp1.replicate.1
stphcy3plogcy5slide581norm
mc2155.vs.Dcrp1.replicate.4
WT.vs..DamtR.N.surplus_rep2
dcpA.knockout.rep2
stphcy5plogcy3slide580norm
X2.5..vs..50..air.saturation.Replicate.4
X2.5..vs..50..air.saturation.Replicate.5
X3dbfcy3plogcy5slide607norm
WT_log.phase_rep1
WT.with.vs..without.N_dye.swap_rep1
X2.5..vs..50..air.saturation.Replicate.1
WT.with.vs..without.N_dye.swap_rep2
WT_stationary.phase_rep2
WT.vs..DglnR.N_starvation_dye.swap_rep1
Biological.replicate.6.of.6..isoniazid.treatment
Biological.replicate.2.of.7..ethambutol.treatment
Slow.vs..Fast.Replicate.4
Slow.vs..Fast.Replicate.5
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.2
Biological.replicate.7.of.7..panaxydol.treatment
dosR.WT_Replicate3
X4dbfcy5plogcy3slide480norm
BatchCulture_LBTbroth_ExponentialPhase_Replicate1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
Log.phase.cultures.without.induction.of.I.SceI.expression..T.0...Atc.
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
X2XR.rep1
X2XR.rep2
DglnR_without.vs..with.N_dyeswap_rep1
Wild.type.rep1.y
Biological.replicate.2.of.6..negative.control
BatchCulture_LBTbroth_StationaryPhase_Replicate4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
Biological.replicate.4.of.6..isoniazid.treatment
Biological.replicate.3.of.6..negative.control
X4dbfcy3plogcy5slide903norm
Biological.replicate.6.of.7..panaxydol.treatment
Wild.type.rep3
Bedaquiline.vs..DMSO.120min
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