Module 197 Residual: 0.52
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.52 | 0.000000000000029 | 0.021 | 82 | 28 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 0.000000000000029 | |
| Motif 2 |
 |
| e-value: 0.021 |
| MSMEG_4752 Uncharacterized protein | MSMEG_6103 Dihydropteroate synthase (DHPS) (EC 2.5.1.15) (Dihydropteroate pyrophosphorylase) |
| MSMEG_4753 Antioxidant, AhpC/TSA family protein (EC 1.11.1.15) (Bacterioferritin comigratory protein) | MSMEG_6102 7,8-dihydroneopterin aldolase (EC 4.1.2.25) |
| MSMEG_2397 Transcriptional regulator, AsnC family (Transcriptional regulatory protein, AsnC family protein) | MSMEG_6104 GTP cyclohydrolase 1 (EC 3.5.4.16) (GTP cyclohydrolase I) |
| MSMEG_3229 Uncharacterized protein | MSMEG_6510 Transport permease protein |
| MSMEG_4298 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11) (Ketopantoate hydroxymethyltransferase) | MSMEG_2880 Enoyl-CoA hydratase (Enoyl-CoA hydratase/isomerase) (EC 4.2.1.17) |
| MSMEG_6509 ABC-type drug export system, ATP-binding protein | MSMEG_3231 ABC transporter, CydDC cysteine exporter (CydDC-E) family protein, permease/ATP-binding protein CydD (Transmembrane ATP-binding protein ABC transporter cydD) (EC 3.6.3.25) |
| MSMEG_6508 MarR family transcriptional regulator (MarR-family protein transcriptional regulator) | MSMEG_3232 Cytochrome D ubiquinol oxidase, subunit II (EC 1.10.3.-) (Integral membrane cytochrome D ubiquinol oxidase (Subunit II) CydB) (EC 3.1.3.1) |
| MSMEG_2398 Thiamine-monophosphate kinase (TMP kinase) (Thiamine-phosphate kinase) (EC 2.7.4.16) | MSMEG_3233 Cytochrome D ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Putative cytochrome ubiquinol oxidase subunit) |
| MSMEG_6193 Anion-transporting ATPase (EC 3.6.3.16) | MSMEG_5968 Polysaccharide biosynthesis protein |
| MSMEG_6195 Anion-transporting ATPase (EC 3.6.3.16) (Ion-transporting ATPase) | MSMEG_2879 Acyl-CoA dehydrogenase |
| MSMEG_3593 Uncharacterized protein | MSMEG_2878 Acyl-CoA dehydrogenase (Putative acyl-CoA dehydrogenase) |
| MSMEG_3592 Uncharacterized protein | MSMEG_6012 Putative acyl-CoA dehydrogenase |
| MSMEG_6101 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3) | MSMEG_4297 Diacylglycerol O-acyltransferase (EC 2.3.1.20) |
| MSMEG_6100 Uncharacterized protein | MSMEG_2810 Major facilitator superfamily MFS_1 (Major facilitator superfamily protein) |
Bedaquiline.vs..DMSO.30min
WT.vs..DglnR.N_starvation_rep2
WT.vs..DamtR.without.N_rep1
Biological.replicate.2.of.7..panaxydol.treatment
dcpA.knockout.rep2
Mycobacterium.smegmatis.Spheroplast.induced
Plogcy5plogcy3slide110norm
Biological.replicate.3.of.7..falcarinol.treatment
dosR.WT_Replicate3
Tet.CarD.vs.Control..Replicates.1..2..and.3.
dosR.WT_Replicate1
Stationary.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
WT.vs..DamtR.N.surplus_dyeswap_rep2
Wild.type.rep1.x
Wild.type.rep1.y
MB100pruR.vs..MB100.rep.4
Biological.replicate.6.of.6..negative.control
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep2
rel.knockout.rep1
Bedaquiline.vs..DMSO..45min
MB100pruR.vs..MB100.rep.2
WT.vs..DamtR.without.N_rep2
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.4.of.6..kanamycin.treatment
X0.6..vs..50..air.saturation.Replicate.1
X3dbfcy5plogcy3slide601norm
X0.6..vs..50..air.saturation.Replicate.3
X0.6..vs..50..air.saturation.Replicate.2
X0.6..vs..50..air.saturation.Replicate.5
X0.6..vs..50..air.saturation.Replicate.4
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
Biological.replicate.7.of.7..panaxydol.treatment
Bedaquiline.vs..DMSO.15min
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
Biological.replicate.5.of.7..panaxydol.treatment
Stationary.cultures.control.without.induction.of.I.SceI.expression..T.0...Atc.
Plogcy5plogcy3slide111norm
stphcy5plogcy3slide580norm
Biological.replicate.3.of.6..kanamycin.treatment
Biological.replicate.4.of.7..ethambutol.treatment
Biological.replicate.2.of.7..ethambutol.treatment
WT_log.phase_rep1
WT.with.vs..without.N_dye.swap_rep1
X2.5..vs..50..air.saturation.Replicate.1
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.2.of.6..kanamycin.treatment
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.6.of.6..isoniazid.treatment
mc2155.vs.Dcrp1.replicate.3
Slow.vs..Fast.Replicate.4
Slow.vs..Fast.Replicate.5
Bedaquiline.vs..DMSO.60min
Biological.replicate.5.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.1
Slow.vs..Fast.Replicate.2
Slow.vs..Fast.Replicate.3
X4dbfcy5plogcy3slide480norm
mc2155.vs.Dcrp1.replicate.1
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
BatchCulture_LBTbroth_ExponentialPhase_Replicate4
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
WT.with.vs..without.N_rep1
Biological.replicate.1.of.6..negative.control
X2XR.rep2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.1
WT.vs..DglnR.N_starvation_rep1
BatchCulture_LBTbroth_StationaryPhase_Replicate4
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
Plogcy5plogcy3slide113norm
BatchCulture_LBTbroth_StationaryPhase_Replicate3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep3
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep1
Biological.replicate.5.of.6..kanamycin.treatment
WT.vs..DamtR.N.surplus_rep2
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