Module 229 Residual: 0.52
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.52 | 5.5e-26 | 0.0079 | 76 | 38 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 5.5e-26 | |
| Motif 2 |
 |
| e-value: 0.0079 |
| MSMEG_4604 Uncharacterized protein | MSMEG_5338 Regulatory protein, MarR (Transcriptional regulator, MarR family) |
| MSMEG_4606 Uncharacterized protein | MSMEG_1022 Uncharacterized protein |
| MSMEG_4626 Ribonuclease E (RNase E) (EC 3.1.26.12) | MSMEG_3238 Sulfurtransferase |
| MSMEG_4623 GTPase Obg (EC 3.6.5.-) (GTP-binding protein Obg) | MSMEG_2302 |
| MSMEG_4621 Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase) (GK) | MSMEG_0912 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) (3-hydroxybutyryl-CoA dehydrogenase FadB2) (EC 1.1.1.-) |
| MSMEG_0920 Uncharacterized protein | MSMEG_3348 Bacterial extracellular solute-binding protein, family protein 7 (TRAP dicarboxylate transporter DctP subunit) |
| MSMEG_3116 Inositol-1-monophosphatase (Inositol-phosphate phosphatase) (EC 3.1.3.25) | MSMEG_6437 Copper resistance protein D |
| MSMEG_5184 Alpha-methylacyl-CoA racemase Mcr (EC 5.1.99.4) (Alpha-methylacyl-CoA racemase, putative) | MSMEG_6436 Copper resistance protein CopC |
| MSMEG_5185 Enoyl-CoA hydratase PaaB (Putative enoyl-COA hydratase Echa11) (EC 4.2.1.17) | MSMEG_2265 Uncharacterized protein |
| MSMEG_5182 2-Nitropropane dioxygenase (2-nitropropane dioxygenase NPD) (EC 1.13.12.16) | MSMEG_0086 1-phosphofructokinase (EC 2.7.1.56) (Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) (1-phosphofructokinase protein)) (EC 2.7.1.56) |
| MSMEG_5183 3-Hydroxyacyl-CoA dehydrogenase (Short-chain dehydrogenase/reductase SDR) (EC 1.1.1.35) | MSMEG_0084 Phosphocarrier protein HPr (EC 2.7.1.69) (Phosphocarrier protein hpr) |
| MSMEG_5339 ABC-type branched-chain amino acid transport system, periplasmic component (Nitrile hydratase regulator1) | MSMEG_0589 L-rhamnose isomerase (EC 5.3.1.-) (EC 5.3.1.14) |
| MSMEG_0078 Uncharacterized protein | MSMEG_0588 Major facilitator superfamily (MFS) family inositol transporter (Putative rhamnose tranport protein, MFS family protein) |
| MSMEG_0590 Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase (EC 1.1.1.1) (EC 4.1.2.19) | MSMEG_0088 Phosphoenolpyruvate-protein phosphotransferase (EC 2.7.3.9) (Phosphotransferase system, enzyme I) |
| MSMEG_0070 Uncharacterized protein | MSMEG_0085 PTS system, Fru family protein, IIABC components (Putative PTS fructose-specific enzyme IIABC) (EC 2.7.1.69) |
| MSMEG_1593 Uncharacterized protein | MSMEG_2667 HpcH/HpaI aldolase/citrate lyase family protein, putative (EC 4.1.3.-) |
| MSMEG_2901 Uncharacterized protein | MSMEG_0077 Uncharacterized protein |
| MSMEG_0087 DeoR family transcriptional regulator (Glucitol operon repressor) | MSMEG_3957 Conserved 13e12 repeat family protein (Uncharacterized protein) |
| MSMEG_1928 Protein serine/threonine phosphatase (EC 3.1.3.16) (Regulatory protein) | MSMEG_2423 Chromosome partition protein Smc |
Bedaquiline.vs..DMSO.30min
WT.vs..DglnR.N_starvation_rep2
M..smegmatis.Acid.NO.treated
Mycobacterium.smegmatis.Spheroplast.induced
dosR.WT_Replicate4
Wild.type.rep3
MB100pruR.vs..MB100..rep.3
KO_log.phase_rep2
KO_log.phase_rep1
Plogcy5plogcy3slide110norm
Biological.replicate.7.of.7..falcarinol.treatment
DglnR_without.vs..with.N_rep2
Biological.replicate.6.of.6..negative.control
WT.vs..DamtR.without.N_.dyeswap_rep1
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.1.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
rel.knockout.rep1
Bedaquiline.vs..DMSO..45min
Biological.replicate.1.of.7..falcarinol.treatment
Biological.replicate.6.of.7..falcarinol.treatment
DamtR.with.vs..DamtR.without.N_.rep1
Biological.replicate.4.of.6..isoniazid.treatment
Biological.replicate.3.of.6..isoniazid.treatment
DamtR.with.vs..DamtR.without.N_.rep2
X0.6..vs..50..air.saturation.Replicate.1
WT_log.phase_rep2
Sub.MIC.INH
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
WT.vs..DamtR.N.surplus_rep2
WT.vs..DamtR.N.surplus_rep1
mc2155.vs.Dcrp1.replicate.2
Plogcy5plogcy3slide113norm
mc2155.vs.Dcrp1.replicate.1
Biological.replicate.4.of.6..negative.control
Biological.replicate.3.of.6..negative.control
dcpA.knockout.rep2
dcpA.knockout.rep1
X2.5..vs..50..air.saturation.Replicate.4
Stationary.phase.cultures.induced.to.express.I.SceI.for.15.minutes..T.15...ATc.
stphcy3plogcy5slide581norm
WT.with.vs..without.N_dye.swap_rep1
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
WT.with.vs..without.N_dye.swap_rep2
WT_stationary.phase_rep2
Log.phase.cultures.induced.to.express.I.SceI.for.45.minutes..T.45...ATc.
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
Tet.CarD.vs.Control..Replicates.1..2..and.3.
WT.vs..DglnR.N_starvation_dye.swap_rep1
Biological.replicate.6.of.7..ethambutol.treatment
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
Biological.replicate.5.of.6..negative.control
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
Biological.replicate.5.of.6..kanamycin.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.2
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
X4dbfcy5plogcy3slide901norm
WT.vs..DamtR.N.surplus_.dyeswap_rep1
WT.with.vs..without.N_rep2
WT.with.vs..without.N_rep1
DglnR_without.vs..with.N_dyeswap_rep2
Biological.replicate.1.of.6..negative.control
Biological.replicate.5.of.7..falcarinol.treatment
Wild.type.rep1.y
WT.vs..DglnR.N_starvation_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
BatchCulture_LBTbroth_StationaryPhase_Replicate2
BatchCulture_LBTbroth_StationaryPhase_Replicate3
Biological.replicate.2.of.6..negative.control
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
WT.vs..DamtR.N.surplus_dyeswap_rep2
Bedaquiline.vs..DMSO.120min
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