Module 660 Residual: 0.54
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
| Residual | Motif 1 e-value | Motif 2 e-value | Conditions | Genes | version |
|---|---|---|---|---|---|
| 0.54 | 3.6e-16 | 22 | 74 | 29 | 20160204 |
| Motif 1 |
 |
|---|---|
| e-value: 3.6e-16 | |
| Motif 2 |
 |
| e-value: 22 |
| MSMEG_2940 Probable transcriptional regulatory protein MSMEG_2940/MSMEI_2866 | MSMEG_6729 DNA-binding protein (Transcriptional regulator, XRE family) |
| MSMEG_6526 Pyridoxamine 5'-phosphate oxidase family protein (Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein) | MSMEG_5203 DoxX family protein (DoxX subfamily protein, putative) |
| MSMEG_6732 Integral membrane protein (Uncharacterized protein) | MSMEG_4775 Enoyl-CoA hydratase (EC 4.2.1.17) (Enoyl-CoA hydratase/isomerase family protein) |
| MSMEG_5202 Conserved membrane protein | MSMEG_6512 Acyl-CoA dehydrogenase (EC 1.3.8.-) (Acyl-CoA dehydrogenase domain protein) |
| MSMEG_5201 GntR family transcriptional regulator (Regulatory protein GntR, HTH) | MSMEG_0905 4-carboxymuconolactone decarboxylase domain protein (EC 4.1.1.44) (Carboxymuconolactone decarboxylase) |
| MSMEG_5200 Uncharacterized protein | MSMEG_6511 Acyl-CoA dehydrogenase (EC 1.3.8.-) (Acyl-CoA dehydrogenase domain protein) |
| MSMEG_5081 Uncharacterized protein | MSMEG_4042 Transcriptional regulator, GntR family (Transcriptional regulator, GntR family protein) |
| MSMEG_0983 Two-component system response regulator | MSMEG_6731 Transcriptional regulator, TetR family (Transcriptional regulatory protein) |
| MSMEG_2546 Transcriptional Regulator, GntR family protein | MSMEG_6208 Acyl-CoA thioesterase (EC 3.1.2.2) (Palmitoyl-CoA hydrolase) |
| MSMEG_0098 Methyltransferase (Methyltransferase type 11) (EC 2.1.1.-) | MSMEG_1690 RNA polymerase sigma factor |
| MSMEG_4266 Uncharacterized protein | MSMEG_0895 Bacterial regulatory protein, GntR family protein (GntR family transcriptional regulator) |
| MSMEG_5014 Copper-translocating P-type ATPase (EC 3.6.3.4) (Heavy metal translocating P-type ATPase) (EC 3.6.3.4) | MSMEG_1501 S-adenosyl-L-methionine-dependent methyltransferase (EC 2.1.1.-) |
| MSMEG_0179 GntR-family transcriptional regulator (Transcriptional regulator, GntR family protein) | MSMEG_3832 4-hydroxyacetophenone monooxygenase (Cyclohexanone monooxygenase) (EC 1.14.13.22) |
| MSMEG_1893 Methyltransferase type 11 (EC 2.1.1.137) (UbiE/COQ5 methyltransferase) | MSMEG_2709 Uncharacterized protein |
| MSMEG_1877 Uncharacterized protein |
KO_stationary.phase_rep1
Biological.replicate.2.of.7..panaxydol.treatment
WT.vs..DamtR.without.N_rep2
WT.with.vs..without.N_dye.swap_rep1
Biological.replicate.4.of.6..isoniazid.treatment
MB100pruR.vs..MB100..rep.3
dosR.WT_Replicate2
KO_log.phase_rep2
KO_log.phase_rep1
DglnR_without.vs..with.N_rep1
Wild.type.rep1.x
Biological.replicate.7.of.7..falcarinol.treatment
MB100pruR.vs..MB100.rep.4
Biological.replicate.3.of.7..panaxydol.treatment
DglnR_without.vs..with.N_rep2
WT.vs..DamtR.without.N_.dyeswap_rep2
MB100pruR.vs..MB100.rep.1
Biological.replicate.1.of.6..isoniazid.treatment
Biological.replicate.7.of.7..ethambutol.treatment
Biological.replicate.6.of.6..kanamycin.treatment
Biological.replicate.3.of.6..kanamycin.treatment
Biological.replicate.5.of.6..isoniazid.treatment
Biological.replicate.6.of.7..falcarinol.treatment
M..smegmatis.Acid.NO.treated
Biological.replicate.3.of.7..ethambutol.treatment
Biological.replicate.3.of.6..isoniazid.treatment
X0.6..vs..50..air.saturation.Replicate.1
X3dbfcy5plogcy3slide601norm
X0.6..vs..50..air.saturation.Replicate.5
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep3
stphcy5plogcy3slide487norm
Biological.replicate.7.of.7..panaxydol.treatment
Biological.replicate.1.of.7..panaxydol.treatment
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep4
Biological.replicate.5.of.7..panaxydol.treatment
Biological.replicate.2.of.7..falcarinol.treatment
Biological.replicate.5.of.6..negative.control
WT_log.phase_rep2
X2.5..vs..50..air.saturation.Replicate.5
Biological.replicate.2.of.7..ethambutol.treatment
Biological.replicate.4.of.7..panaxydol.treatment
X2.5..vs..50..air.saturation.Replicate.1
DamtR.with.vs..DamtR.without.N_dyeswap_.rep1
X2.5..vs..50..air.saturation.Replicate.3
WT_stationary.phase_rep2
Biological.replicate.6.of.6..isoniazid.treatment
X4XR.rep2
Biological.replicate.2.of.6..isoniazid.treatment
Slow.vs..Fast.Replicate.5
WT.with.vs..without.N_dye.swap_rep2
Biological.replicate.4.of.7..falcarinol.treatment
WT.vs..DglnR.N_starvation_dye.swap_rep2
Slow.vs..Fast.Replicate.3
BatchCulture_LBTbroth_ExponentialPhase_Replicate2
dosR.WT_Replicate3
mc2155.pMind..vs.mc2155.pMind.6189.replicate.4
Biological.replicate.5.of.6..kanamycin.treatment
mc2155.pMind..vs.mc2155.pMind.6189.replicate.3
M.smegmatis_mc2_155_dMSMEG_0166_study_mutant_rep1
WT.with.vs..without.N_rep2
Biological.replicate.5.of.7..falcarinol.treatment
DglnR_without.vs..with.N_dyeswap_rep2
DglnR_without.vs..with.N_dyeswap_rep1
WT.vs..DglnR.N_starvation_rep1
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep3
JR121..pJR29.VapC..vs..JR121..pJR230..VapBC..rep2
Plogcy5plogcy3slide113norm
BatchCulture_LBTbroth_StationaryPhase_Replicate3
BatchCulture_LBTbroth_StationaryPhase_Replicate1
Biological.replicate.2.of.6..negative.control
M.smegmatis_mc2_155_dMSMEG_0166_study_wild.type_rep2
Biological.replicate.3.of.6..negative.control
Biological.replicate.1.of.6..kanamycin.treatment
Bedaquiline.vs..DMSO.120min
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