10129 Dtyr_deacylase superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
10129 chr_15 Dtyr_deacylase superfamily 338672 339338 - Dtyr_deacylase superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7451884 Thaps10129.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0314

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0229
 0.40

Most Highly Correlated Transcripts

41636

PolY_Pol_IV_kappa
0.8655

5692

Peptidase_C15 superfamily
0.8477

260906

pyridoxal_pyridoxamine_kinase
0.837

5797

ThTPase
0.8356

262616

(MYB22)
0.8333

22918

hypothetical protein
0.8328

3650

hypothetical protein
0.8235

269231

MFS
0.8126

20752

hypothetical protein
0.8121

11234

hypothetical protein
0.8114

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Dtyr_deacylase superfamily D-Tyrosyl-tRNAtyr deacylases; a class of tRNA-dependent hydrolases which are capable of hydrolyzing... - 210.626 41 - 187 superfamily 241728

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_38963 PHATRDRAFT_38963 232999 237065 432264 Cre12.g542000.t1.1 AT4G18460.1 351116

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005737 GO:0016788 GO:0019478 GO:0004518 GO:0042578 -

GO:0005737

cytoplasm

Details: 
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO Category: 
CC

GO:0016788

hydrolase activity, acting on ester bonds

Details: 
Catalysis of the hydrolysis of any ester bond.
GO Category: 
MF

GO:0019478

D-amino acid catabolic process

Details: 
The chemical reactions and pathways resulting in the breakdown of D-amino acids, the D-enantiomers of amino acids.
GO Category: 
BP

GO:0004518

nuclease activity

Details: 
Catalysis of the hydrolysis of ester linkages within nucleic acids.
GO Category: 
MF

GO:0042578

phosphoric ester hydrolase activity

Details: 
Catalysis of the reaction: RPO-R' + H2O = RPOOH + R'H. This reaction is the hydrolysis of any phosphoric ester bond, any ester formed from orthophosphoric acid, O=P(OH)3.
GO Category: 
MF

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