10722 Lipase superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
10722 chr_17 Lipase superfamily 523004 525293 + Lipase superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7442149 Thaps10722.2, Thaps10722.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0362

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0057
 0.46

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9817

bd1095

(bd1095) NA
0.8618

bd1094

(bd1094) FH2 superfamily
0.856

bd1092

(bd1092) NA
0.8243

262217

hypothetical protein
0.7973

7123

REX4_like
0.7966

1436

hypothetical protein
0.7893

2641

DOMON_DOH
0.7883

9180

hypothetical protein
0.7845

bd1360

(bd1360) ycf24
0.7816

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Lipase superfamily Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and... - 74.8202 3.67E-15 456 - 630 superfamily 265473

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
37786 Not available 243045 308429 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004812 GO:0005524 GO:0006418 GO:0004806 GO:0006629 -

GO:0004812

aminoacyl-tRNA ligase activity

Details: 
Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP.
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0006418

tRNA aminoacylation for protein translation

Details: 
The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis.
GO Category: 
BP

GO:0004806

triglyceride lipase activity

Details: 
Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a carboxylate.
GO Category: 
MF

GO:0006629

lipid metabolic process

Details: 
The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
GO Category: 
BP

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