16390 Peptidase_C1A
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
16390 chr_8 Peptidase_C1A 612157 613974 - Peptidase_C1A

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0421

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0249
 0.31

Most Highly Correlated Transcripts

bd410

(bd410) HNHc
0.9768

bd415

(bd415) arom_aa_hydroxylase superfamily
0.9664

bd1841

(bd1841) CAP10 superfamily
0.9603

41632

Asp
0.903

bd1941

(bd1941) NA
0.9005

38360

Peptidase_C1 superfamily
0.8871

20708

MPP_ACP5
0.8866

bd1808

(bd1808) NA
0.883

36297

pepsin_retropepsin_like superfamily
0.8799

15093

Peptidase_S10 superfamily
0.8746

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_C1A Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs)... cl00298 240.604 1.12E-76 220 - 429 specific 239068
Peptidase_C1 superfamily C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed... - 240.604 1.12E-76 220 - 429 superfamily 260335
Inhibitor_I29 Cathepsin propeptide inhibitor domain (I29); This domain is found at the N-terminus of some C1... cl07031 76.1287 2.28E-17 123 - 180 specific 254690
Inhibitor_I29 superfamily Cathepsin propeptide inhibitor domain (I29); This domain is found at the N-terminus of some C1... - 76.1287 2.28E-17 123 - 180 superfamily 263147

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 437163 Cre09.g407700.t1.2 AT2G34080.1 353435

KEGG

KEGG description KEGG Pathway
Phagosome map04145

GO Terms

GO:0004197 GO:0006508 GO:0008234 GO:0016946 -

GO:0004197

cysteine-type endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
GO Category: 
MF

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0008234

cysteine-type peptidase activity

Details: 
Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
GO Category: 
MF

GO:0016946

NA

Details: 
NA
GO Category: 
NA

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