20753 PDI_a_familyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
20753	chr_1	PDI_a_family	1104257	1107584	+	PDI_a_family

Synonyms

NCBI ID	Ensembl Genomes exon ID
7446828	Thaps20753.2, Thaps20753.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0135

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0255	0.31	150 10000

Most Highly Correlated Transcripts

267964 Cullin 0.9327	23137 hypothetical protein 0.9309	9364 hypothetical protein 0.9187	3694 hypothetical protein 0.9177	21722 Aldo_ket_red 0.9149	10474 hypothetical protein 0.9145
21469 hypothetical protein 0.9135	20944 Glyco_tranf_GTA_type superfamily 0.912	25678 hypothetical protein 0.9116	1985 hypothetical protein 0.9098

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PDI_a_family		Protein Disulfide Isomerase (PDIa) family, redox active TRX domains; composed of eukaryotic...	cl00388	64.5541	2.95E-12	79 - 156	specific	239259
Thioredoxin_like superfamily		Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; The thioredoxin (TRX...	-	64.5541	2.95E-12	79 - 156	superfamily	260398

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_43224	PHATRDRAFT_43224	232771	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0005489 GO:0006118 -

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