20952 MscS
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
20952 chr_1 MscS 2174106 2175897 - MscS

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0470

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0228
 0.34

Most Highly Correlated Transcripts

bd1813

(bd1813) NA
0.9125

bd1801

(bd1801) NA
0.887

bd738

(bd738) NA
0.8869

bd1802

(bd1802) NA
0.8735

bd739

(bd739) NA
0.8643

bd692

(bd692) NA
0.8487

bd616

(bd616) NA
0.834

bd824

(bd824) NA
0.8208

4411

hypothetical protein
0.8095

bd895

(bd895) NA
0.8049

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MS_channel superfamily Mechanosensitive ion channel; Two members of this protein family from M. jannaschii have been... - 88.4074 2.58E-20 249 - 456 superfamily 250229
MscS Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane] - 95.7577 3.03E-22 197 - 460 multi-dom 223740

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 57591 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016020 -

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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