22696 Dcp
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
22696 chr_5 Dcp 961783 964452 + Dcp

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0164

Most Highly Correlated Transcripts

30701

PRK05279
0.9368

268257

fabG
0.9139

1086

Glyco_transf_49 superfamily
0.9109

22507

hypothetical protein
0.9046

21909

(Tp_bZIP17) regulator [Rayko]
0.902

4064

NADB_Rossmann superfamily
0.9013

1676

hypothetical protein
0.9001

21223

hypothetical protein
0.8997

3180

hypothetical protein
0.8966

261400

NA
0.8939

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
M3A_DCP Peptidase family M3 dipeptidyl carboxypeptidase (DCP); Peptidase family M3 dipeptidyl... cl14813 743.887 0 50 - 681 specific 188995
GluZincin superfamily Peptidase Gluzincin family (thermolysin-like proteinases, TLPs) includes peptidases M1, M2, M3, M4... - 743.887 0 50 - 681 superfamily 265459
Dcp Zn-dependent oligopeptidases [Amino acid transport and metabolism] - 614.667 0 25 - 681 multi-dom 223416

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_48190 PHATRDRAFT_48190 184740 264158 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004222 GO:0006508 GO:0008956 -

GO:0004222

metalloendopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO Category: 
MF

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0008956

NA

Details: 
NA
GO Category: 
NA

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