25498 E3_UbLigase_R4 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
25498 chr_19a_19 E3_UbLigase_R4 superfamily 567505 575582 - E3_UbLigase_R4 superfamily

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0108

Most Highly Correlated Transcripts

bd1842

(bd1842) NA
0.94

25811

hypothetical protein
0.8989

25297

Chorein_N
0.8953

22837

hypothetical protein
0.889

2120

hypothetical protein
0.8869

20865

DUF1162 superfamily
0.8868

bd1941

(bd1941) NA
0.8824

24828

CAP_GLY
0.8719

5298

hypothetical protein
0.8693

7695

SPRY_RanBP_like
0.8691

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
E3_UbLigase_R4 superfamily E3 ubiquitin-protein ligase UBR4; This is a family of E## ubiquitin ligase enzymes. - 213.346 9.93E-57 1326 - 2383 superfamily 258050

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 245596 238290 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004842 -

GO:0004842

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF

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