262863 BAR_SNX
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262863 chr_6 BAR_SNX 970151 971852 - BAR_SNX

Synonyms

NCBI ID Ensembl Genomes exon ID
7445949 Thaps262863.1, Thaps262863.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0143

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0264
 0.37

Most Highly Correlated Transcripts

16295

FBPase
0.9137

260816

DAGK_acc superfamily
0.9085

38123

Arrestin_N superfamily
0.9073

37497

cysE
0.904

261981

0.9005

261400

NA
0.8957

23170

hypothetical protein
0.8945

25576

Galactosyl_T superfamily
0.8931

37054

ascorbate_peroxidase
0.8916

262296

Hydrolase_4 superfamily
0.8907

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
BAR_SNX The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexins; BAR domains are dimerization, lipid binding... cl12013 201.816 5.59E-61 230 - 452 specific 153280
BAR superfamily The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects... - 201.816 5.59E-61 230 - 452 superfamily 264507
PX_SNX1_2_like The phosphoinositide binding Phox Homology domain of Sorting Nexins 1 and 2; The PX domain is a... cl02563 155.429 4.38E-45 67 - 185 specific 132769
PX_domain superfamily The Phox Homology domain, a phosphoinositide binding module; The PX domain is a phosphoinositide (... - 155.429 4.38E-45 67 - 185 superfamily 261344

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Cre06.g281050.t1.2 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0007242 -

GO:0007242

NA

Details: 
NA
GO Category: 
NA

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