269448 MATE_DinF_like
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
269448 chr_9 MATE_DinF_like 871855 873667 - MATE_DinF_like

Synonyms

NCBI ID Ensembl Genomes exon ID
7450967 Thaps269448.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0067

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0052
 0.43

Most Highly Correlated Transcripts

4108

hypothetical protein
0.983

24538

hypothetical protein
0.9099

36525

PRK09427
0.9096

9512

PTZ00168
0.9009

40293

TRX_family
0.8987

36007

Aldolase_II superfamily
0.8983

bd1765

(bd1765) NA
0.8981

24525

hypothetical protein
0.8968

bd1777

(bd1777) NA
0.8955

260850

(KE4) Zip
0.8922

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MATE_DinF_like DinF and similar proteins, a subfamily of the multidrug and toxic compound extrusion (MATE)-like... cl09326 294.083 8.51E-93 122 - 579 specific 240541
MATE_like superfamily Multidrug and toxic compound extrusion family and similar proteins; The integral membrane proteins... - 294.083 8.51E-93 122 - 579 superfamily 263758
NorM Na+-driven multidrug efflux pump [Defense mechanisms] - 195.906 1.16E-55 123 - 576 multi-dom 223608

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_23253 PHATRDRAFT_23253 223195 162569 112672 Cre04.g213000.t1.2 AT3G08040.2 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006855 GO:0015238 GO:0015297 GO:0016020 -

GO:0006855

drug transmembrane transport

Details: 
The process in which a drug is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0015238

drug transmembrane transporter activity

Details: 
Enables the directed movement of a drug from one side of a membrane to the other. A drug is any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease.
GO Category: 
MF

GO:0015297

antiporter activity

Details: 
Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out).
GO Category: 
MF

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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